RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RPUSD3Q6P087 351 aaKnown RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TTC33Q6PID6 262 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 FIGNL1Q6PIW4 674 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ZAR1Q86SH2 424 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 AMIGO2Q86SJ2 522 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 PTOV1Q86YD1 416 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 EPHX4Q8IUS5 362 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SVOPLQ8N434 492 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CBR4Q8N4T8 237 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 OR10G3Q8NGC4 313 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 OR4C3Q8NH37 302 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 C9orf43Q8TAL5 461 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 FBXO30Q8TB52 745 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 OIT3Q8WWZ8 545 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 NMD3Q96D46 503 aaKnown RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TMCO6Q96DC7 493 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 FRMD6Q96NE9 622 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 NODALQ96S42 347 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ANGPTL4Q9BY76 406 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TRIM8Q9BZR9 551 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF350Q9GZX5 532 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SLC25A18Q9H1K4 315 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SEMA6AQ9H2E6 1030 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 MAGIXQ9H6Y5 334 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 MTHFD2LQ9H903 347 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CSAG2Q9Y5P2 127 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TRAV17A0A0B4J275 112 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 DLGAP1O14490 977 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 F10P00742 488 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 ARAFP10398 606 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 CYP4B1P13584 511 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 CD46P15529 392 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 IL12BP29460 328 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 KRT20P35900 424 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 PTGDSP41222 190 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 CASP3P42574 277 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 GAS1P54826 345 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 ADARB1P78563 741 aaKnown RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 OC90Q02509 493 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 RBBP4Q09028 425 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 TOP3AQ13472 1001 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF141Q15928 474 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF630Q2M218 657 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 RFX4Q33E94 735 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 FAM98BQ52LJ0 330 aaKnown RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 KLHL26Q53HC5 615 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 RBM48Q5RL73 367 aaKnown RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 GCNT6Q5T4J0 391 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 C16orf62Q7Z3J2 963 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 SPPL2CQ8IUH8 684 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 CYP4Z2PQ8N1L4 340 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 OR10A6Q8NH74 314 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 EFHD2Q96C19 240 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 ZG16BQ96DA0 208 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 UBL7Q96S82 380 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 SLC38A1Q9H2H9 487 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF71Q9NQZ8 489 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-206ENST00000565990 UBQLN4Q9NRR5 601 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 USE1Q9NZ43 259 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 P2RX2Q9UBL9 471 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 KCNE5Q9UJ90 142 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 AURKCQ9UQB9 309 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 B3GNT3Q9Y2A9 372 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 PCDHGA10Q9Y5H3 936 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 DSPPQ9NZW4 1301 aa11.56□□□□□ -0.56
SF3B3-206ENST00000565990 IGSF10Q6WRI0 2623 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 A0A0G2JPF8 293 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 HNRNPCL3B7ZW38 293 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 ATXN7O15265 892 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CLOCKO15516 846 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 NME2P1O60361 137 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 GCM2O75603 506 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-206ENST00000565990 SLC25A12O75746 678 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 SNX4O95219 450 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 UTS2O95399 124 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CHRM4P08173 479 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 HNRNPCL4P0DMR1 293 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CCL3P10147 92 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 GGT1P19440 569 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 NME2P22392 152 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 ADH7P40394 386 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 ATP12AP54707 1039 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 GABARAPL2P60520 117 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 RPP38P78345 283 aaKnown RBP11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CDK6Q00534 326 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CHRNEQ04844 493 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CHRNB3Q05901 458 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 VEZF1Q14119 521 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 GNA13Q14344 377 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF766Q5HY98 468 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 REEP3Q6NUK4 255 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 SLC30A6Q6NXT4 461 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 APOOLQ6UXV4 268 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 FRRS1Q6ZNA5 592 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 LINC00299Q6ZSB3 139 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 ZZZ3Q8IYH5 903 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 PSD4Q8NDX1 1056 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 GRHL3Q8TE85 626 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms