RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PDSS1Q5T2R2 415 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 ZNF610Q8N9Z0 462 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 OR2V1Q8NHB1 315 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 POC1BQ8TC44 478 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 PHOSPHO1Q8TCT1 267 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 NUDT8Q8WV74 236 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 MED18Q9BUE0 208 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 PLSCR4Q9NRQ2 329 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 GLRX2Q9NS18 164 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 KLHL28Q9NXS3 571 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLN6-206ENST00000565471 ACTL7BQ9Y614 415 aa17.82■□□□□ 0.44
CLN6-206ENST00000565471 V9GYY5 206 aaPredicted RBP17.82■□□□□ 0.44
CLN6-206ENST00000565471 NPIPB9F8W1W9 429 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 H3BNH8 94 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 TM9SF1O15321 606 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 CFLARO15519 480 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 ITM2AO43736 263 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 CXCL13O43927 109 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 SYNGR4O95473 234 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 PLGP00747 810 aaPredicted RBP17.81■□□□□ 0.44
CLN6-206ENST00000565471 IL11P20809 199 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 CRYGSP22914 178 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 ADH6P28332 368 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 KCNJ5P48544 419 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 ATP12AP54707 1039 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 ABCE1P61221 599 aaKnown RBP17.81■□□□□ 0.44
CLN6-206ENST00000565471 HBA1P69905 142 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 CHI3L2Q15782 390 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 PPP4R4Q6NUP7 873 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 KIRREL3Q8IZU9 778 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 ZNF781Q8N8C0 355 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 OR7D2Q96RA2 312 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 KLHDC3Q9BQ90 382 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 PARD6BQ9BYG5 372 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 ICAM5Q9UMF0 924 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.81■□□□□ 0.44
CLN6-206ENST00000565471 RAP2CQ9Y3L5 183 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 KCNE3Q9Y6H6 103 aa17.81■□□□□ 0.44
CLN6-206ENST00000565471 NUP214P35658 2090 aaPredicted RBP17.8■□□□□ 0.44
CLN6-206ENST00000565471 A0A0J9YW62 118 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 WDR91A4D1P6 747 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 DEFB108AA8MXU0 73 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 TNFSF11O14788 317 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 MYZAPP0CAP1 466 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 DHRS4L1P0CG22 281 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 CD53P19397 219 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 P2RX1P51575 399 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 CTBP2P56545 445 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 PDCD2Q16342 344 aaPredicted RBP17.8■□□□□ 0.44
CLN6-206ENST00000565471 HBMQ6B0K9 141 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 KLHL15Q96M94 604 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 TMEM185BQ9H7F4 350 aa17.8■□□□□ 0.44
CLN6-206ENST00000565471 BEX4Q9NWD9 120 aaPredicted RBP17.8■□□□□ 0.44
CLN6-206ENST00000565471 C6orf203Q9P0P8 240 aaPredicted RBP17.8■□□□□ 0.44
CLN6-206ENST00000565471 UQCRHLA0A096LP55 91 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 NPIPA5A0A0B4J1W7 369 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 DUXAA6NLW8 204 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 NPIPA7E9PJI5 369 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 RNASET2O00584 256 aaKnown RBP17.79■□□□□ 0.44
CLN6-206ENST00000565471 SIAH2O43255 324 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 AK1P00568 194 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 OPN1LWP04000 364 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 NPIPA8P0DM63 369 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 SOAT1P35610 550 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 ADAM8P78325 824 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 FOXF1Q12946 379 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 FOXD4Q12950 439 aaPredicted RBP17.79■□□□□ 0.44
CLN6-206ENST00000565471 PGS1Q32NB8 556 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 TNFAIP8L3Q5GJ75 292 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
CLN6-206ENST00000565471 CBLN3Q6UW01 205 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 LRRC34Q8IZ02 419 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 LILRA2Q8N149 483 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 OR8J2Q8NGG1 315 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 OR5AK3PQ8NH89 298 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 SDF2Q99470 211 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 ZNF395Q9H8N7 513 aaPredicted RBP17.79■□□□□ 0.44
CLN6-206ENST00000565471 AKTIPQ9H8T0 292 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 HAO1Q9UJM8 370 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 CARD8Q9Y2G2 431 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 DTNAQ9Y4J8 743 aa17.79■□□□□ 0.44
CLN6-206ENST00000565471 GPC6Q9Y625 555 aaPredicted RBP17.79■□□□□ 0.44
CLN6-206ENST00000565471 GJE1A6NN92 205 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 OIP5O43482 229 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 NUDT14O95848 222 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 PABPC4LP0CB38 370 aaKnown RBP17.78■□□□□ 0.44
CLN6-206ENST00000565471 PPP3CBP16298 524 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 RPL14P50914 215 aaKnown RBP17.78■□□□□ 0.44
CLN6-206ENST00000565471 GTF2IRD2BQ6EKJ0 949 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 OR4F3Q6IEY1 312 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 GTF2IRD2Q86UP8 949 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 CLECL1Q8IZS7 167 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 OR5D16Q8NGK9 328 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 OSTF1Q92882 214 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 MARK4Q96L34 752 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 SORT1Q99523 831 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 C20orf27Q9GZN8 174 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 NMUR2Q9GZQ4 415 aa17.78■□□□□ 0.44
CLN6-206ENST00000565471 FANCFQ9NPI8 374 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms