RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 FAHD2BQ6P2I3 314 aaPredicted RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 SLC39A4Q6P5W5 647 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZNF549Q6P9A3 640 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 VWA1Q6PCB0 445 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZCCHC12Q6PEW1 402 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 CD200R1LQ6Q8B3 271 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 QSOX2Q6ZRP7 698 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 LANCL3Q6ZV70 420 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 LRP10Q7Z4F1 713 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 CYP4Z1Q86W10 505 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 UNC93AQ86WB7 457 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TRAPPC5Q8IUR0 188 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZDHHC21Q8IVQ6 265 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 MTURNQ8N3F0 131 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TOMM5Q8N4H5 51 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 KCNRGQ8N5I3 272 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 MYCT1Q8N699 235 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZNF548Q8NEK5 533 aaPredicted RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 OR7G2Q8NG99 324 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 OR5M3Q8NGP4 307 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 OR1J1Q8NGS3 322 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 FAM110BQ8TC76 370 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 CD300LFQ8TDQ1 290 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ORAOV1Q8WV07 137 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 RNF141Q8WVD5 230 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 EXTL1Q92935 676 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ATG4CQ96DT6 458 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 NUDT11Q96G61 164 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 FAHD2AQ96GK7 314 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 SLC41A3Q96GZ6 507 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TMEM19Q96HH6 336 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TPD52L3Q96J77 140 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 DCAF5Q96JK2 942 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 C5orf34Q96MH7 638 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 INTS14Q96SY0 518 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZNF670Q9BS34 389 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 JAM3Q9BX67 310 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 FAM117AQ9C073 453 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TKTL2Q9H0I9 626 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 CSTL1Q9H114 145 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 SMDT1Q9H4I9 107 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 RIOX1Q9H6W3 641 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZFYVE1Q9HBF4 777 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 GPRC5CQ9NQ84 441 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 SERHLQ9NQF3 203 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 EXOSC3Q9NQT5 275 aaKnown RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 UBQLN4Q9NRR5 601 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TMEM100Q9NV29 134 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 UQCC1Q9NVA1 299 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TMEM184CQ9NVA4 438 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 RBM22Q9NW64 420 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TXNL4BQ9NX01 149 aaKnown RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 MARCH5Q9NX47 278 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 RCC2Q9P258 522 aaKnown RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 ZNF70Q9UC06 446 aaPredicted RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 EXO1Q9UQ84 846 aaKnown RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 LSM2Q9Y333 95 aaKnown RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 RPL36Q9Y3U8 105 aaKnown RBP5.9□□□□□ -1.46
PTPN9-204ENST00000564970 CHST2Q9Y4C5 530 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 TIMM10BQ9Y5J6 103 aa5.9□□□□□ -1.46
PTPN9-204ENST00000564970 QSER1Q2KHR3 1735 aa5.9□□□□□ -1.47
PTPN9-204ENST00000564970 KIAA1551Q9HCM1 1747 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 C20orf202A1L168 122 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 CXorf65A6NEN9 183 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 GGT3PA6NGU5 568 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 G3V3G9 751 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 ACKR2O00590 384 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 OR7A17O14581 309 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 MEIS2O14770 477 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 ARPC5O15511 151 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 ZNF749O43361 778 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 BCL2L11O43521 198 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 SYT7O43581 403 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 EIF4E2O60573 245 aaKnown RBP5.89□□□□□ -1.47
PTPN9-204ENST00000564970 CYTIPO60759 359 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 SEMA7AO75326 666 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 ENTPD6O75354 484 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 AKR7A3O95154 331 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 UBL3O95164 117 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 KAT7O95251 611 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 SIX6O95475 246 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 NFATC1O95644 943 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 MT-ND5P03915 603 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 HLA-DPB1P04440 258 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 NBEAP1P0C6P0 100 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 TBC1D3HP0C7X1 549 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 SPATA31C1P0DKV0 1188 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 EPXP11678 715 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 SLC25A4P12235 298 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 ZNF37AP17032 561 aaPredicted RBP5.89□□□□□ -1.47
PTPN9-204ENST00000564970 TBPP20226 339 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 CCNOP22674 350 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 AKT1P31749 480 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 BTCP35070 178 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 SLC19A1P41440 591 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 OR3A1P47881 315 aa5.89□□□□□ -1.47
PTPN9-204ENST00000564970 CLK2P49760 499 aaKnown RBP5.89□□□□□ -1.47
PTPN9-204ENST00000564970 VASPP50552 380 aaPredicted RBP5.89□□□□□ -1.47
PTPN9-204ENST00000564970 DAPP51397 102 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms