RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 C6orf203Q9P0P8 240 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-205ENST00000564899 ABCG2Q9UNQ0 655 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 CHST2Q9Y4C5 530 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 DTNAQ9Y4J8 743 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 DOPEY1Q5JWR5 2465 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 PRAMEF25A6NGN4 478 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 K7EM74 188 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 FRS3O43559 492 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 MAN1A2O60476 641 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 DIRAS1O95057 198 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 CST1P01037 141 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 LDLRP01130 860 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 NGFRP08138 427 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 ITGA2P17301 1181 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 EVI2BP34910 448 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 SOX3P41225 446 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 UQCRFS1P47985 274 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 RGS8P57771 180 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-205ENST00000564899 CDC20Q12834 499 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 ATP6AP1Q15904 470 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 SNCBQ16143 134 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 NRF1Q16656 503 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 ZSWIM7Q19AV6 140 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 CRTC2Q53ET0 693 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-205ENST00000564899 KLHL26Q53HC5 615 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 B3GNTL1Q67FW5 361 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-205ENST00000564899 H3F3CQ6NXT2 135 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 BORAQ6PGQ7 559 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 OPN5Q6U736 354 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 DEF8Q6ZN54 512 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 NUP54Q7Z3B4 507 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 PIWIL3Q7Z3Z3 882 aaKnown RBP10.16□□□□□ -0.78
SF3B3-205ENST00000564899 LACC1Q8IV20 430 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 CMIPQ8IY22 773 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 FAM26EQ8N5C1 309 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 TMEM156Q8N614 296 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 TMEM102Q8N9M5 508 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-205ENST00000564899 GATSQ8NAP1 163 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 OR4D11Q8NGI4 311 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 ASB15Q8WXK1 588 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 TMCO6Q96DC7 493 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 WFDC6Q9BQY6 131 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 AMBRA1Q9C0C7 1298 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 LHPPQ9H008 270 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 RASSF4Q9H2L5 321 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 AGPAT4Q9NRZ5 378 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 NDUFAF4Q9P032 175 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 RIMS3Q9UJD0 308 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 POLHQ9Y253 713 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 SLC35A3Q9Y2D2 325 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 ENPP4Q9Y6X5 453 aa10.16□□□□□ -0.78
SF3B3-205ENST00000564899 ALG1L2C9J202 215 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 H3BNH8 94 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 GNGT2O14610 69 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 TP53I11O14683 189 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 CLOCKO15516 846 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 SCO2O43819 266 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 FADS1O60427 444 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 BCAS1O75363 584 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 DEAF1O75398 565 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 OR6B1O95007 311 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 CSTAP01040 98 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 SFTPCP11686 197 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 YAP1P46937 504 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 CLK3P49761 638 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 ST13P50502 369 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 TRIP10Q15642 601 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 CD226Q15762 336 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 NPTX1Q15818 432 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 NTRK2Q16620 822 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 MEP1AQ16819 746 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 ZNF791Q3KP31 576 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 IQCCQ4KMZ1 466 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 ACER2Q5QJU3 275 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 FNDC7Q5VTL7 733 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 HMBOX1Q6NT76 420 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 AMIGO2Q86SJ2 522 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 CYP4Z1Q86W10 505 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 RBM45Q8IUH3 476 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 DND1Q8IYX4 353 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 POGLUT1Q8NBL1 392 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 OR10G3Q8NGC4 313 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 OR6T1Q8NGN1 323 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 PHOSPHO1Q8TCT1 267 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 PSMF1Q92530 271 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 CNOT9Q92600 299 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 ZNF300Q96RE9 604 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 NODALQ96S42 347 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 ZNF347Q96SE7 839 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 TBL1XR1Q9BZK7 514 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 SEMA6AQ9H2E6 1030 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 HPF1Q9NWY4 346 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 DNAJB12Q9NXW2 375 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 STOML1Q9UBI4 398 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 DNAJB9Q9UBS3 223 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 TEKT2Q9UIF3 430 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 FAM32AQ9Y421 112 aaKnown RBP10.15□□□□□ -0.78
SF3B3-205ENST00000564899 OTOGQ6ZRI0 2925 aa10.15□□□□□ -0.78
SF3B3-205ENST00000564899 A0A1W2PQD3 144 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms