RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CCDC157Q569K6 752 aa18■□□□□ 0.47
CLN6-205ENST00000564846 SLX4IPQ5VYV7 408 aa18■□□□□ 0.47
CLN6-205ENST00000564846 PAPD4Q6PIY7 484 aaKnown RBP18■□□□□ 0.47
CLN6-205ENST00000564846 HSDL2Q6YN16 418 aa18■□□□□ 0.47
CLN6-205ENST00000564846 ZNF517Q6ZMY9 492 aaPredicted RBP18■□□□□ 0.47
CLN6-205ENST00000564846 SLCO6A1Q86UG4 719 aa18■□□□□ 0.47
CLN6-205ENST00000564846 P3H2Q8IVL5 708 aa18■□□□□ 0.47
CLN6-205ENST00000564846 NLGN4XQ8N0W4 816 aa18■□□□□ 0.47
CLN6-205ENST00000564846 SLC34A3Q8N130 599 aa18■□□□□ 0.47
CLN6-205ENST00000564846 APCDD1LQ8NCL9 501 aa18■□□□□ 0.47
CLN6-205ENST00000564846 VMP1Q96GC9 406 aa18■□□□□ 0.47
CLN6-205ENST00000564846 ADOQ96SZ5 270 aa18■□□□□ 0.47
CLN6-205ENST00000564846 GPA33Q99795 319 aa18■□□□□ 0.47
CLN6-205ENST00000564846 WDR77Q9BQA1 342 aaPredicted RBP18■□□□□ 0.47
CLN6-205ENST00000564846 ZPBPQ9BS86 351 aa18■□□□□ 0.47
CLN6-205ENST00000564846 NRSN2Q9GZP1 204 aa18■□□□□ 0.47
CLN6-205ENST00000564846 A0A0B4J2E0 115 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 A0A1B0GX12 115 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 WBP4O75554 376 aaKnown RBP17.99■□□□□ 0.47
CLN6-205ENST00000564846 LYPD3O95274 346 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 SOX14O95416 240 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 TP53P04637 393 aaPredicted RBP17.99■□□□□ 0.47
CLN6-205ENST00000564846 FPR3P25089 353 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 FMO3P31513 532 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 PLCXD2Q0VAA5 305 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 NRMQ8IXM6 262 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 APH1BQ8WW43 257 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 PMEPA1Q969W9 287 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 POLR1BQ9H9Y6 1135 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 COL27A1Q8IZC6 1860 aaPredicted RBP17.99■□□□□ 0.47
CLN6-205ENST00000564846 CDC14CA4D256 554 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 TNFRSF10AO00220 468 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 CHP2O43745 196 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 TSPAN2O60636 221 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 ITIH1P19827 911 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 PNLIPRP2P54317 469 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 FNDC7Q5VTL7 733 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 TMEM236Q5W0B7 351 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 FAM198BQ6UWH4 519 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 RASSF6Q6ZTQ3 369 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 PRR22Q8IZ63 422 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 FAM71CQ8NEG0 241 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 OR8K3Q8NH51 312 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 NUBPLQ8TB37 319 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 TMEM239Q8WW34 195 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 OMA1Q96E52 524 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 FAM46AQ96IP4 442 aaKnown RBP17.99■□□□□ 0.47
CLN6-205ENST00000564846 MPP4Q96JB8 637 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 HS6ST2Q96MM7 605 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 EXOSC3Q9NQT5 275 aaKnown RBP17.99■□□□□ 0.47
CLN6-205ENST00000564846 ZNF226Q9NYT6 803 aa17.99■□□□□ 0.47
CLN6-205ENST00000564846 ZNF223Q9UK11 482 aaPredicted RBP17.99■□□□□ 0.47
CLN6-205ENST00000564846 A0A1B0GWA3 101 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 KLF4O43474 513 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 ADAM11O75078 769 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 NGFRP08138 427 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 GABRB1P18505 474 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 ABCD3P28288 659 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 STAT5AP42229 794 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 CSRP2Q16527 193 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 ISXQ2M1V0 245 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 CDCP2Q5VXM1 449 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 FOXB2Q5VYV0 432 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 FAM199XQ6PEV8 388 aaPredicted RBP17.98■□□□□ 0.47
CLN6-205ENST00000564846 RAB11FIP2Q7L804 512 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 LIN37Q96GY3 246 aaPredicted RBP17.98■□□□□ 0.47
CLN6-205ENST00000564846 FLRT3Q9NZU0 649 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 CNIH4Q9P003 139 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 AASSQ9UDR5 926 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 PCDHGA1Q9Y5H4 931 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 B3GALT1Q9Y5Z6 326 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 RALGAPA1Q6GYQ0 2036 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 SPEGQ15772 3267 aa17.98■□□□□ 0.47
CLN6-205ENST00000564846 C4orf47A7E2U8 309 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 PTGES3LE9PB15 166 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 XPNPEP2O43895 674 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 OR6B1O95007 311 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 NTN1O95631 604 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 IGFBP1P08833 259 aaPredicted RBP17.97■□□□□ 0.47
CLN6-205ENST00000564846 UBL4AP11441 157 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 NRG3P56975 720 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 NCF4Q15080 339 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 C12orf73Q69YU5 71 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 ULK3Q6PHR2 472 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 CASP12Q6UXS9 341 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 WDR88Q6ZMY6 472 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 KCTD8Q6ZWB6 473 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 OR5L2Q8NGL0 311 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 RNF217Q8TC41 542 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 GRHL3Q8TE85 626 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 TRUB1Q8WWH5 349 aaKnown RBP17.97■□□□□ 0.47
CLN6-205ENST00000564846 MESP1Q9BRJ9 268 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 DUSP21Q9H596 190 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 VCX3AQ9NNX9 186 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 PLCXD1Q9NUJ7 323 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 RPS6KB2Q9UBS0 482 aa17.97■□□□□ 0.47
CLN6-205ENST00000564846 MRPS14O60783 128 aaKnown RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 FAM20BO75063 409 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 LRP3O75074 770 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 CD63P08962 238 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms