RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 FNDC11Q9BVV2 318 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 BHLHE41Q9C0J9 482 aaPredicted RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 WDR26Q9H7D7 661 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 BRWD1Q9NSI6 2320 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 RCE1Q9Y256 329 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 F8W036 122 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 IL3P08700 152 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 PDHA2P29803 388 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ACVR1BP36896 505 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 MAPK9P45984 424 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 SNRPD1P62314 119 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 FLI1Q01543 452 aaPredicted RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 LIPJQ5W064 366 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 CAMKMTQ7Z624 323 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 OR6T1Q8NGN1 323 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 GOT1L1Q8NHS2 421 aaPredicted RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 NEIL2Q969S2 332 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 PELOQ9BRX2 385 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 FUZQ9BT04 418 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 IGFLR1Q9H665 355 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 RNF215Q9Y6U7 377 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 PRAMEF27A3QJZ7 478 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 LINC01553A4QN01 128 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 PRR23D1E9PI22 279 aaPredicted RBP15.18■□□□□ 0.02
LINC00554-201ENST00000564841 PRR23D2P0DMB1 279 aaPredicted RBP15.18■□□□□ 0.02
LINC00554-201ENST00000564841 CEBPBP17676 345 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 AKR1C2P52895 323 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 HTRA4P83105 476 aaPredicted RBP15.18■□□□□ 0.02
LINC00554-201ENST00000564841 AKR1C1Q04828 323 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF763Q0D2J5 394 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 MESP2Q0VG99 397 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 HSPB3Q12988 150 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 GPR33Q49SQ1 333 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 PYHIN1Q6K0P9 492 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 C22orf39Q6P5X5 142 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 PRICKLE2Q7Z3G6 844 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 FGD2Q7Z6J4 655 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 KLHL36Q8N4N3 616 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF740Q8NDX6 193 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 C16orf78Q8WTQ4 265 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 IRF7Q92985 503 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 BRD9Q9H8M2 597 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ZDHHC3Q9NYG2 299 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 FXYD6-FXYD2A0A087WZ82 144 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ARHGEF33A8MVX0 844 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 PRSS44E7EML9 344 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 PEX14O75381 377 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 MOSPD3O75425 235 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 RECQLP46063 649 aaPredicted RBP15.18■□□□□ 0.02
LINC00554-201ENST00000564841 CAMK1Q14012 370 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 C2orf68Q2NKX9 166 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 C18orf63Q68DL7 685 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF322Q6U7Q0 402 aaPredicted RBP15.18■□□□□ 0.02
LINC00554-201ENST00000564841 OR56B4Q8NH76 319 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ASZ1Q8WWH4 475 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 SLC25A28Q96A46 364 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ORAI1Q96D31 301 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 CHFRQ96EP1 664 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 FAM46AQ96IP4 442 aaKnown RBP15.18■□□□□ 0.02
LINC00554-201ENST00000564841 FXYD6Q9H0Q3 95 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 ACTR10Q9NZ32 417 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 MLXQ9UH92 298 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 GLS2Q9UI32 602 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 SLC25A13Q9UJS0 675 aa15.18■□□□□ 0.02
LINC00554-201ENST00000564841 HYAL3O43820 417 aaPredicted RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 WDPCPO95876 746 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 SLC16A8O95907 504 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 GNSP15586 552 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 TRIM23P36406 574 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 C21orf58P58505 322 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 TMEM215Q68D42 235 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 SLC27A4Q6P1M0 643 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 AGTRAPQ6RW13 159 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 CEACAM19Q7Z692 300 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 SERPINA12Q8IW75 414 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 CLP1Q92989 425 aaKnown RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 ECHDC3Q96DC8 303 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 LRRC3BQ96PB8 259 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 TEFMQ96QE5 360 aaKnown RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 EXOSC3Q9NQT5 275 aaKnown RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 COA4Q9NYJ1 87 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 AP1M2Q9Y6Q5 423 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 A0A0G2JK05 382 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 RTCAO00442 366 aaKnown RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 SDC3O75056 442 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 RGS9O75916 674 aaPredicted RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 GDNFP39905 211 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 CTSCP53634 463 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 LTB4RQ15722 352 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 ELP2Q6IA86 826 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF783Q6ZMS7 281 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 ZFP82Q8N141 532 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 C17orf47Q8NEP4 570 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 OR4Q3Q8NH05 313 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 TEX47Q8TBZ9 253 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 PDXPQ96GD0 296 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 YIPF4Q9BSR8 244 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 SUV39H2Q9H5I1 410 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 CBLCQ9ULV8 474 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms