RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZBED6CLQ96FA7 236 aaPredicted RBP12.54□□□□□ -0.4
CDR2-204ENST00000564542 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
CDR2-204ENST00000564542 KLHDC3Q9BQ90 382 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 SRXN1Q9BYN0 137 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 POTEKPQ9BYX7 375 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 TIGARQ9NQ88 270 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 EMCNQ9ULC0 261 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 LIPT1Q9Y234 373 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 CCL27Q9Y4X3 112 aa12.54□□□□□ -0.4
CDR2-204ENST00000564542 A0A1W2PP18 115 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 NPIPB8E9PQR5 432 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 G3V2L1 256 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 TBX19O60806 448 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 SEC22BO75396 215 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 HSPA4LO95757 839 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 ALOX5P09917 674 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 MYL2P10916 166 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 PYGBP11216 843 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 SHC1P29353 583 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 ACVR1BP36896 505 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
CDR2-204ENST00000564542 P2RY6Q15077 328 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 CD226Q15762 336 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 ZCCHC12Q6PEW1 402 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 PODNL1Q6PEZ8 512 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 DNM1P46Q6ZS02 220 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
CDR2-204ENST00000564542 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 TUSC5Q8IXB3 177 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 CNPY4Q8N129 248 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 COX18Q8N8Q8 333 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 KBTBD8Q8NFY9 601 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 NEUROG1Q92886 237 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 KISS1RQ969F8 398 aaPredicted RBP12.53□□□□□ -0.4
CDR2-204ENST00000564542 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 CCT7Q99832 543 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 REEP4Q9H6H4 257 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 TNFRSF12AQ9NP84 129 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 ACSS1Q9NUB1 689 aaPredicted RBP12.53□□□□□ -0.4
CDR2-204ENST00000564542 DCDC2Q9UHG0 476 aa12.53□□□□□ -0.4
CDR2-204ENST00000564542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDR2-204ENST00000564542 GJE1A6NN92 205 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 URI1O94763 535 aaPredicted RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 NTN1O95631 604 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 IFNA2P01563 188 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 FESP07332 822 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 UROSP10746 265 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 ZNF117Q03924 483 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 BSPH1Q075Z2 132 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 PDE7AQ13946 482 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 PGGHGQ32M88 737 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 EXOSC6Q5RKV6 272 aaKnown RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 CCNJQ5T5M9 372 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 MTERF4Q7Z6M4 381 aaKnown RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 ATG4DQ86TL0 474 aaPredicted RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 HIPK1Q86Z02 1210 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 ZNF619Q8N2I2 560 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 PIWIL2Q8TC59 973 aaKnown RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 MZB1Q8WU39 189 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 JADE3Q92613 823 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 C16orf58Q96GQ5 468 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 FCRL1Q96LA6 429 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 BTBD2Q9BX70 525 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 TRIM2Q9C040 744 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 BARX1Q9HBU1 254 aaPredicted RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 C1orf109Q9NX04 203 aa12.52□□□□□ -0.41
CDR2-204ENST00000564542 PSMC3IPQ9P2W1 217 aaPredicted RBP12.52□□□□□ -0.41
CDR2-204ENST00000564542 ABCA1O95477 2261 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 SLC28A1O00337 649 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 RIPK2O43353 540 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 RGS14O43566 566 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 AKAP10O43572 662 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 GLRA3O75311 464 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 PRKD3O94806 890 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 ADAP00813 363 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 YES1P07947 543 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 SDC1P18827 310 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 SUMO3P55854 103 aaPredicted RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 DNAJB13P59910 316 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 POU6F2P78424 691 aaPredicted RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 FAPQ12884 760 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 ITGADQ13349 1161 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 CFAP157Q5JU67 520 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 BHLHA15Q7RTS1 189 aaPredicted RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 ZFP90Q8TF47 636 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 OTUB1Q96FW1 271 aaPredicted RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms