RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 ZNF117Q03924 483 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 XKR7Q5GH72 579 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 BEX5Q5H9J7 111 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 CDC73Q6P1J9 531 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 YTHDF3Q7Z739 585 aaKnown RBP21.33■■□□□ 1.01
NME3-206ENST00000564252 LILRA2Q8N149 483 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 OR2W6PQ8NHA6 318 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 PSMA8Q8TAA3 256 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 IGFBPL1Q8WX77 278 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 ARSGQ96EG1 525 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 PERPQ96FX8 193 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 PPP3R2Q96LZ3 170 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 KLHL15Q96M94 604 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 Q96MF0 132 aa21.33■■□□□ 1.01
NME3-206ENST00000564252 DNHD1Q96M86 4753 aa21.32■■□□□ 1
NME3-206ENST00000564252 TLDC2A0PJX2 215 aa21.32■■□□□ 1
NME3-206ENST00000564252 MAPK1P28482 360 aa21.32■■□□□ 1
NME3-206ENST00000564252 SHC1P29353 583 aa21.32■■□□□ 1
NME3-206ENST00000564252 AGTR1P30556 359 aa21.32■■□□□ 1
NME3-206ENST00000564252 RPL3P39023 403 aaKnown RBP21.32■■□□□ 1
NME3-206ENST00000564252 FOXF1Q12946 379 aa21.32■■□□□ 1
NME3-206ENST00000564252 PTGR1Q14914 329 aa21.32■■□□□ 1
NME3-206ENST00000564252 PDSS1Q5T2R2 415 aa21.32■■□□□ 1
NME3-206ENST00000564252 BEND4Q6ZU67 534 aa21.32■■□□□ 1
NME3-206ENST00000564252 MTERF4Q7Z6M4 381 aaKnown RBP21.32■■□□□ 1
NME3-206ENST00000564252 AGR3Q8TD06 166 aa21.32■■□□□ 1
NME3-206ENST00000564252 OR5P2Q8WZ92 322 aa21.32■■□□□ 1
NME3-206ENST00000564252 OSTF1Q92882 214 aa21.32■■□□□ 1
NME3-206ENST00000564252 CHMP6Q96FZ7 201 aa21.32■■□□□ 1
NME3-206ENST00000564252 CXorf36Q9H7Y0 433 aa21.32■■□□□ 1
NME3-206ENST00000564252 EML4Q9HC35 981 aaKnown RBP21.32■■□□□ 1
NME3-206ENST00000564252 SLC17A7Q9P2U7 560 aa21.32■■□□□ 1
NME3-206ENST00000564252 SNX8Q9Y5X2 465 aa21.32■■□□□ 1
NME3-206ENST00000564252 FAM171A2A8MVW0 826 aa21.31■■□□□ 1
NME3-206ENST00000564252 H7C1Q1 480 aa21.31■■□□□ 1
NME3-206ENST00000564252 OIP5O43482 229 aa21.31■■□□□ 1
NME3-206ENST00000564252 EFNA2O43921 213 aa21.31■■□□□ 1
NME3-206ENST00000564252 PEX11AO75192 247 aa21.31■■□□□ 1
NME3-206ENST00000564252 LY6G6DO95868 133 aa21.31■■□□□ 1
NME3-206ENST00000564252 ELK4P28324 431 aa21.31■■□□□ 1
NME3-206ENST00000564252 ARRB2P32121 409 aa21.31■■□□□ 1
NME3-206ENST00000564252 EIF1P41567 113 aaKnown RBP21.31■■□□□ 1
NME3-206ENST00000564252 CARD18P57730 90 aa21.31■■□□□ 1
NME3-206ENST00000564252 ZNF239Q16600 458 aaKnown RBP21.31■■□□□ 1
NME3-206ENST00000564252 KLHL26Q53HC5 615 aa21.31■■□□□ 1
NME3-206ENST00000564252 CBLN3Q6UW01 205 aa21.31■■□□□ 1
NME3-206ENST00000564252 ZCCHC23Q6ZST2 131 aa21.31■■□□□ 1
NME3-206ENST00000564252 PHOSPHO1Q8TCT1 267 aa21.31■■□□□ 1
NME3-206ENST00000564252 NUDT8Q8WV74 236 aa21.31■■□□□ 1
NME3-206ENST00000564252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.31■■□□□ 1
NME3-206ENST00000564252 C3orf30Q96M34 536 aa21.31■■□□□ 1
NME3-206ENST00000564252 ACTRT3Q9BYD9 372 aa21.31■■□□□ 1
NME3-206ENST00000564252 GSX2Q9BZM3 304 aa21.31■■□□□ 1
NME3-206ENST00000564252 ACTR6Q9GZN1 396 aa21.31■■□□□ 1
NME3-206ENST00000564252 OR10A4Q9H209 315 aa21.31■■□□□ 1
NME3-206ENST00000564252 FANCFQ9NPI8 374 aa21.31■■□□□ 1
NME3-206ENST00000564252 GPATCH2Q9NW75 528 aa21.31■■□□□ 1
NME3-206ENST00000564252 PRR14LQ5THK1 2151 aa21.31■■□□□ 1
NME3-206ENST00000564252 NPIPA5A0A0B4J1W7 369 aa21.3■■□□□ 1
NME3-206ENST00000564252 NPIPA7E9PJI5 369 aa21.3■■□□□ 1
NME3-206ENST00000564252 TUBBP07437 444 aa21.3■■□□□ 1
NME3-206ENST00000564252 NPIPA8P0DM63 369 aa21.3■■□□□ 1
NME3-206ENST00000564252 PSMB1P20618 241 aaKnown RBP21.3■■□□□ 1
NME3-206ENST00000564252 ATP6V1C1P21283 382 aa21.3■■□□□ 1
NME3-206ENST00000564252 SFTPDP35247 375 aa21.3■■□□□ 1
NME3-206ENST00000564252 CCT3P49368 545 aaKnown RBP21.3■■□□□ 1
NME3-206ENST00000564252 RNF144AP50876 292 aaPredicted RBP21.3■■□□□ 1
NME3-206ENST00000564252 TP53BP2Q13625 1128 aa21.3■■□□□ 1
NME3-206ENST00000564252 DCST2Q5T1A1 773 aa21.3■■□□□ 1
NME3-206ENST00000564252 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.3■■□□□ 1
NME3-206ENST00000564252 ZNF704Q6ZNC4 412 aaPredicted RBP21.3■■□□□ 1
NME3-206ENST00000564252 PLEKHM3Q6ZWE6 761 aa21.3■■□□□ 1
NME3-206ENST00000564252 STK32CQ86UX6 486 aa21.3■■□□□ 1
NME3-206ENST00000564252 RIBC1Q8N443 379 aaPredicted RBP21.3■■□□□ 1
NME3-206ENST00000564252 OR56A1Q8NGH5 318 aa21.3■■□□□ 1
NME3-206ENST00000564252 RNF128Q8TEB7 428 aa21.3■■□□□ 1
NME3-206ENST00000564252 ROBO4Q8WZ75 1007 aa21.3■■□□□ 1
NME3-206ENST00000564252 C1orf50Q9BV19 199 aa21.3■■□□□ 1
NME3-206ENST00000564252 SRXN1Q9BYN0 137 aa21.3■■□□□ 1
NME3-206ENST00000564252 C12orf49Q9H741 205 aa21.3■■□□□ 1
NME3-206ENST00000564252 ICAM5Q9UMF0 924 aa21.3■■□□□ 1
NME3-206ENST00000564252 GPR52Q9Y2T5 361 aa21.3■■□□□ 1
NME3-206ENST00000564252 KCNE3Q9Y6H6 103 aa21.3■■□□□ 1
NME3-206ENST00000564252 TLN2Q9Y4G6 2542 aa21.3■■□□□ 1
NME3-206ENST00000564252 SPAG7O75391 227 aa21.29■■□□□ 1
NME3-206ENST00000564252 SLU7O95391 586 aaKnown RBP21.29■■□□□ 1
NME3-206ENST00000564252 PLAUP00749 431 aa21.29■■□□□ 1
NME3-206ENST00000564252 ADH6P28332 368 aa21.29■■□□□ 1
NME3-206ENST00000564252 PTH2RP49190 550 aa21.29■■□□□ 1
NME3-206ENST00000564252 P2RX1P51575 399 aa21.29■■□□□ 1
NME3-206ENST00000564252 NR1H2P55055 460 aa21.29■■□□□ 1
NME3-206ENST00000564252 ATP6AP1LQ52LC2 224 aa21.29■■□□□ 1
NME3-206ENST00000564252 C6orf136Q5SQH8 315 aa21.29■■□□□ 1
NME3-206ENST00000564252 GTF2IRD2BQ6EKJ0 949 aa21.29■■□□□ 1
NME3-206ENST00000564252 GTF2IRD2Q86UP8 949 aa21.29■■□□□ 1
NME3-206ENST00000564252 KRTCAP2Q8N6L1 136 aa21.29■■□□□ 1
NME3-206ENST00000564252 ZNF527Q8NB42 609 aa21.29■■□□□ 1
NME3-206ENST00000564252 FBXO27Q8NI29 283 aa21.29■■□□□ 1
NME3-206ENST00000564252 ADAMTS15Q8TE58 950 aa21.29■■□□□ 1
NME3-206ENST00000564252 ABHD3Q8WU67 409 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms