RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 KAT8Q9H7Z6 458 aaKnown RBP12.15□□□□□ -0.46
SPG7-207ENST00000563218 QPCTLQ9NXS2 382 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 CNIH4Q9P003 139 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 GMPR2Q9P2T1 348 aaKnown RBP12.15□□□□□ -0.46
SPG7-207ENST00000563218 DTX4Q9Y2E6 619 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 PCDHGB3Q9Y5G1 929 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 SNX13Q9Y5W8 968 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 SNX8Q9Y5X2 465 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 GMEB1Q9Y692 573 aa12.15□□□□□ -0.46
SPG7-207ENST00000563218 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
SPG7-207ENST00000563218 RNF103-CHMP3A0A140T963 221 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 FAM220BPB1ANY3 271 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 ACOT8O14734 319 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 GSTA4O15217 222 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 OR10H2O60403 315 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 ATP6V1G2O95670 118 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 GPR75O95800 540 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 RAF1P04049 648 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 GPX2P18283 190 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 FEN1P39748 380 aaKnown RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 CDK9P50750 372 aaKnown RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 CCNIQ14094 377 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 CYP51A1Q16850 503 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 DEFB113Q30KQ7 82 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 WIPI1Q5MNZ9 446 aaPredicted RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 FBXW10Q5XX13 1052 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 VASNQ6EMK4 673 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 CCDC116Q8IYX3 515 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 C9orf106Q8NAJ2 232 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 BHLHE22Q8NFJ8 381 aaPredicted RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 PNPT1Q8TCS8 783 aaKnown RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 NANOS1Q8WY41 292 aaKnown RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 RIT1Q92963 219 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 CNRIP1Q96F85 164 aaPredicted RBP12.14□□□□□ -0.47
SPG7-207ENST00000563218 ZNF583Q96ND8 569 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 GNRHR2Q96P88 292 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 TRIB1Q96RU8 372 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 SPATA9Q9BWV2 254 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 PLEKHF2Q9H8W4 249 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 EGFL7Q9UHF1 273 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 MAGEL2Q9UJ55 1249 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 C15orf41Q9Y2V0 281 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 DSCAMO60469 2012 aa12.14□□□□□ -0.47
SPG7-207ENST00000563218 C2orf92A0A1B0GVN3 265 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 ELOVL7A1L3X0 281 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 EEF1E1-BLOC1S5C9J1V9 151 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 GNB5O14775 395 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 EEF1E1O43324 174 aaKnown RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 DYRK3O43781 588 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 FKBP6O75344 327 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 HPNP05981 417 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 PORP16435 677 aaPredicted RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 BMP7P18075 431 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 TIMP3P35625 211 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 ERFP50548 548 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 XKP51811 444 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 LTBQ06643 244 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 FOXF2Q12947 444 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 DAZAP2Q15038 168 aaPredicted RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 NNATQ16517 81 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 SERPINA11Q86U17 422 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 SPATA24Q86W54 205 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 CALHM3Q86XJ0 350 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 MICU2Q8IYU8 434 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 VWA5B2Q8N398 1253 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 OR5AK3PQ8NH89 298 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 SLC26A7Q8TE54 656 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 WDYHV1Q96HA8 205 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 REXO5Q96IC2 774 aaKnown RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 RSRC1Q96IZ7 334 aaKnown RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 ZNF681Q96N22 645 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 SIRT3Q9NTG7 399 aaPredicted RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 ACTR3BQ9P1U1 418 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
SPG7-207ENST00000563218 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 ARID1AO14497 2285 aa12.13□□□□□ -0.47
SPG7-207ENST00000563218 ZANQ9Y493 2812 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
SPG7-207ENST00000563218 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
SPG7-207ENST00000563218 TUBAL3A6NHL2 446 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
SPG7-207ENST00000563218 OR6C76A6NM76 312 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 ARPC2O15144 300 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 PSMG1O95456 288 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 IL2RAP01589 272 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 EPXP11678 715 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 CRATP43155 626 aa12.12□□□□□ -0.47
SPG7-207ENST00000563218 CCT3P49368 545 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms