RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CCL27Q9Y4X3 112 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 SNX8Q9Y5X2 465 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 SMIM23A6NLE4 172 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 GJE1A6NN92 205 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 H3BNH8 94 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 AZIN1O14977 448 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 PLIN3O60664 434 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 NTN1O95631 604 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 HSPA4LO95757 839 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 TP53P04637 393 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 LINC00032P0C843 101 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 NEFHP12036 1026 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 CPA3P15088 417 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 DDX5P17844 614 aaKnown RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 PRPH2P23942 346 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 SHC1P29353 583 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 HPCAL1P37235 193 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 MAP3K8P41279 467 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 POU6F2P78424 691 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF117Q03924 483 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 KIAA0040Q15053 153 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 LRIG3Q6UXM1 1119 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 CXXC5Q7LFL8 322 aaKnown RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 NUFIP2Q7Z417 695 aaKnown RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 TUSC5Q8IXB3 177 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 DDIASQ8IXT1 998 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF614Q8N883 585 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 BANPQ8N9N5 519 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF527Q8NB42 609 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 FBXO27Q8NI29 283 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 FAM110BQ8TC76 370 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 RNF128Q8TEB7 428 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 MZB1Q8WU39 189 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 CDS1Q92903 461 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 KISS1RQ969F8 398 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF764Q96H86 408 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 KLHDC3Q9BQ90 382 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 BTBD2Q9BX70 525 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 C12orf65Q9H3J6 166 aaKnown RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 ACSS1Q9NUB1 689 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-202ENST00000562722 OXSMQ9NWU1 459 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 KLHL13Q9P2N7 655 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 ADAM21Q9UKJ8 722 aa11.57□□□□□ -0.56
SF3B3-202ENST00000562722 A0A1W2PP18 115 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 A0A1W2PQD3 144 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 GTPBP1O00178 669 aaKnown RBP11.56□□□□□ -0.56
SF3B3-202ENST00000562722 COPEO14579 308 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF195O14628 629 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 TBX19O60806 448 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 CRLF1O75462 422 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 PRKD3O94806 890 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 ADAP00813 363 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 LINGO3P0C6S8 592 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 FAM153BP0C7A2 387 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 ELK4P28324 431 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 SLC7A1P30825 629 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 IDUAP35475 653 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 CDKN1AP38936 164 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 ASMTP46597 345 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 FAPQ12884 760 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 LASP1Q14847 261 aaKnown RBP11.56□□□□□ -0.56
SF3B3-202ENST00000562722 TAB1Q15750 504 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 TMEM176BQ3YBM2 270 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-202ENST00000562722 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 SPDYE7PQ495Y7 208 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 SFRP5Q5T4F7 317 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 LIPMQ5VYY2 423 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 ZCCHC12Q6PEW1 402 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 TFAP2EQ6VUC0 442 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 R3HCC1LQ7Z5L2 792 aaKnown RBP11.56□□□□□ -0.56
SF3B3-202ENST00000562722 TMCO5AQ8N6Q1 288 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 OR2T11Q8NH01 316 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 RFWD2Q8NHY2 731 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 SMAP2Q8WU79 429 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-202ENST00000562722 HSD17B8Q92506 261 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 FAM120BQ96EK7 910 aaKnown RBP11.56□□□□□ -0.56
SF3B3-202ENST00000562722 SRXN1Q9BYN0 137 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 NTMQ9P121 344 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 CARD8Q9Y2G2 431 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 TMED5Q9Y3A6 229 aa11.56□□□□□ -0.56
SF3B3-202ENST00000562722 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 NPIPA5A0A0B4J1W7 369 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 NPIPA7E9PJI5 369 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 GCM2O75603 506 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 HMGN2P05204 90 aaKnown RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 FESP07332 822 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 SOD3P08294 240 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 NPIPA8P0DM63 369 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 ADH6P28332 368 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 CRHR1P34998 444 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 FRKP42685 505 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 CCR4P51679 360 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 TP53BP2Q13625 1128 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 PDE7AQ13946 482 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 STK11Q15831 433 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 ETFDHQ16134 617 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 RFTN2Q52LD8 501 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 NCMAPQ5T1S8 102 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms