RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 KCNA7Q96RP8 456 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SMC6Q96SB8 1091 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 ZNF382Q96SR6 550 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 AIF1LQ9BQI0 150 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 EFCAB11Q9BUY7 163 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 MS4A8Q9BY19 250 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 ULBP3Q9BZM4 244 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 C20orf27Q9GZN8 174 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SLC26A1Q9H2B4 701 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 FANCEQ9HB96 536 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CUTCQ9NTM9 273 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 PSD3Q9NYI0 1048 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 AKAP7Q9P0M2 348 aaPredicted RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 IL17BQ9UHF5 180 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CCL27Q9Y4X3 112 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SLC22A7Q9Y694 548 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CFAP47Q6ZTR5 3102 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 APC2O95996 2303 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 MAP1BP46821 2468 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 A0A0A6YYC8 382 aaPredicted RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 A0A1B0GX78 115 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 A0A1W2PQ72 361 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 TMEM120BA0PK00 339 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 PABPN1LA6NDY0 278 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 MAGEB17A8MXT2 336 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 H0YIG0 161 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 I3L1I5 382 aaPredicted RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 FOXE1O00358 373 aaPredicted RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 PLPP1O14494 284 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 TM9SF1O15321 606 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 BIRC5O15392 142 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 NDUFS4O43181 175 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 SUPT7LO94864 414 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ZWINTO95229 277 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 NSA2O95478 260 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 CLDN9O95484 217 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 PDYNP01213 254 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 CSTBP04080 98 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 EIF2S1P05198 315 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 CHRNGP07510 517 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 FGF4P08620 206 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 HBQ1P09105 142 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 RAB40ALP0C0E4 278 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ALOX12P18054 663 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 IL1RNP18510 177 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 CXCR2P25025 360 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 BSGP35613 385 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 OR1D4P47884 311 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 CENPAP49450 140 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ARSFP54793 590 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 PKNOX1P55347 436 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 MAGOHP61326 146 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 RPS18P62269 152 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 ARL16Q0P5N6 197 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 FOXO1Q12778 655 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 TBL3Q12788 808 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 LCP2Q13094 533 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 BLMHQ13867 455 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 RUNX2Q13950 521 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 NCF4Q15080 339 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 RBBP5Q15291 538 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 ZRSR2Q15696 482 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 SYT16Q17RD7 645 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 NKAIN1Q4KMZ8 207 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 C1orf189Q5VU69 101 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 KHDRBS2Q5VWX1 349 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 MED27Q6P2C8 311 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 PRMT9Q6P2P2 845 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 RNF165Q6ZSG1 346 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ZCCHC23Q6ZST2 131 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 C9orf139Q6ZV77 190 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ADCK2Q7Z695 626 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 VASH2Q86V25 355 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ESX1Q8N693 406 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 METTL27Q8N6F8 245 aaPredicted RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 TTC29Q8NA56 475 aaPredicted RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 CAMKVQ8NCB2 501 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 TRPV3Q8NET8 790 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 OR5T3Q8NGG3 340 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 OR9A4Q8NGU2 314 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 HUS1BQ8NHY5 278 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 KCNE4Q8WWG9 221 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 RNF183Q96D59 192 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 CCDC126Q96EE4 140 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 SCMH1Q96GD3 660 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 PKNOX2Q96KN3 472 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 UHRF2Q96PU4 802 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 OR1F2PQ96R84 312 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 F2RL3Q96RI0 385 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 SORT1Q99523 831 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 EPYCQ99645 322 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 DRC3Q9H069 523 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 TUBB1Q9H4B7 451 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 ACTR8Q9H981 624 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 FARSBQ9NSD9 589 aaKnown RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 ARGLU1Q9NWB6 273 aaPredicted RBP4.2□□□□□ -1.74
SMG1-206ENST00000562668 OR6C3Q9NZP0 311 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 CTSFQ9UBX1 484 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 HAO1Q9UJM8 370 aa4.2□□□□□ -1.74
SMG1-206ENST00000562668 PADI1Q9ULC6 663 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms