RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ABHD3Q8WU67 409 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TMEM171Q8WVE6 324 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ROBO4Q8WZ75 1007 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 JADE3Q92613 823 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 OSTF1Q92882 214 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CDS1Q92903 461 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 BTBD2Q9BX70 525 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 SRXN1Q9BYN0 137 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 OR10A4Q9H209 315 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ZCCHC3Q9NUD5 404 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GPR52Q9Y2T5 361 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TMED5Q9Y3A6 229 aa14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ANK3Q12955 4377 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 KIAA1324LA8MWY0 1029 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 INAFM1C9JVW0 142 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 HS3ST1O14792 307 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GCM2O75603 506 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NTN1O95631 604 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CHRNGP07510 517 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 RNF144AP50876 292 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CARD18P57730 90 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 LASP1Q14847 261 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 UGT3A2Q3SY77 523 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 PDSS1Q5T2R2 415 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CBLN3Q6UW01 205 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 STK32CQ86UX6 486 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GABRG1Q8N1C3 465 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ZNF611Q8N823 705 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 OR7A2PQ8NGA2 310 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 RAB3IL1Q8TBN0 382 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 UBLCP1Q8WVY7 318 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 S100PBPQ96BU1 408 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 MTERF3Q96E29 417 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 STACQ99469 402 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TRMOQ9BU70 441 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 FANCFQ9NPI8 374 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 DUSP22Q9NRW4 184 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GIMAP2Q9UG22 337 aa14.88□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CUBNO60494 3623 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NPIPA5A0A0B4J1W7 369 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NPIPA7E9PJI5 369 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 PIP5K1BO14986 540 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 SCAMP2O15127 329 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TRIM13O60858 407 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 HSPA4LO95757 839 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NPIPA8P0DM63 369 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ELK4P28324 431 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 EIF1P41567 113 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ASMTP46597 345 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TSC22D1Q15714 1073 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TFAP2EQ6VUC0 442 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NUFIP2Q7Z417 695 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TUSC5Q8IXB3 177 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 DDIASQ8IXT1 998 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 LILRB1Q8NHL6 650 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 KIF18AQ8NI77 898 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 PHOSPHO1Q8TCT1 267 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TWIST2Q8WVJ9 160 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 AKAP1Q92667 903 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ZNF524Q96C55 264 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 MDFIQ99750 246 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 PIGUQ9H490 435 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CXorf56Q9H5V9 222 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GIN1Q9NXP7 522 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 KLHL13Q9P2N7 655 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ATP6V1HQ9UI12 483 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ICAM5Q9UMF0 924 aa14.87□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 KIF2AO00139 706 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CHEK2O96017 543 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 FGF4P08620 206 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 LAMP1P11279 417 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TOMM34Q15785 309 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NDUFAF6Q330K2 333 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 KLHL26Q53HC5 615 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GTF2IRD2BQ6EKJ0 949 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ALKBH2Q6NS38 261 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CDC73Q6P1J9 531 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 LRIG3Q6UXM1 1119 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 R3HCC1LQ7Z5L2 792 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 MTERF4Q7Z6M4 381 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 GTF2IRD2Q86UP8 949 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 STEAP2Q8NFT2 490 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 FBXO27Q8NI29 283 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CPNE4Q96A23 557 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CHMP6Q96FZ7 201 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CXorf36Q9H7Y0 433 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 COQ10BQ9H8M1 238 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 PPCSQ9HAB8 311 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 MID2Q9UJV3 735 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 CARD8Q9Y2G2 431 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 SNX8Q9Y5X2 465 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 KCNE3Q9Y6H6 103 aa14.86□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ZNF195O14628 629 aa14.85□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 TMCC2O75069 709 aa14.85□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 NUDT14O95848 222 aa14.85□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 PABPC4LP0CB38 370 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ADH6P28332 368 aa14.85□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 ALDH3A1P30838 453 aa14.85□□□□□ -0.03
VPS9D1-AS1-201ENST00000562298 HPCAL1P37235 193 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms