RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SLC22A2O15244 555 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 HCRTR2O43614 444 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 SNX3O60493 162 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 WDR1O75083 606 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 NUDT7P0C024 238 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 TFPTP0C1Z6 253 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 HK1P19367 917 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 TCEA1P23193 301 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 PPIBP23284 216 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 CHMP24386 653 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 LHX2P50458 406 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 SMSP52788 366 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 PLPPR5Q32ZL2 321 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 NDUFAF6Q330K2 333 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 COQ5Q5HYK3 327 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 RAET1LQ5VY80 246 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 ULK2Q8IYT8 1036 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 B4GALNT2Q8NHY0 566 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 WDYHV1Q96HA8 205 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 SFXN2Q96NB2 322 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 NPAS1Q99742 590 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 ELAC2Q9BQ52 826 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 NSRP1Q9H0G5 558 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 ICAM5Q9UMF0 924 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 CARD8Q9Y2G2 431 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 RPH3AQ9Y2J0 694 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 CAPN7Q9Y6W3 813 aa14.03□□□□□ -0.16
RABGGTA-219ENST00000560871 ZNF407Q9C0G0 2248 aa14.02□□□□□ -0.16
RABGGTA-219ENST00000560871 NBPF19A0A087WUL8 3843 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 OR2M5A3KFT3 312 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 C7orf72A4D263 438 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 GMNCA6NCL1 334 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 H3BNH8 94 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 FXYD1O00168 92 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 HNRNPRO43390 633 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 GMFGO60234 142 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 BCAS1O75363 584 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 BCHEP06276 602 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 ARAFP10398 606 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 NR2F1P10589 423 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 UBL4AP11441 157 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 ZNF17P17021 662 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 ACVR2AP27037 513 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 GRNP28799 593 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 PGM1P36871 562 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 P2RX1P51575 399 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 CRISP3P54108 245 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 SUMO3P55854 103 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 SKP2Q13309 424 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 TRMT5Q32P41 509 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 GLYR1Q49A26 553 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 RUNDC3AQ59EK9 446 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 ZNF585AQ6P3V2 769 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 AAGABQ6PD74 315 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 HMGN2P46Q86SG4 172 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 PM20D2Q8IYS1 436 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 EID3Q8N140 333 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 SLC38A5Q8WUX1 472 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 TMEM19Q96HH6 336 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 ANKRD27Q96NW4 1050 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 CGREF1Q99674 301 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 FAM107BQ9H098 131 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 A4GALTQ9NPC4 353 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 MED17Q9NVC6 651 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 THUMPD1Q9NXG2 353 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 ARMCX1Q9P291 453 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 VDAC3Q9Y277 283 aa14.02□□□□□ -0.17
RABGGTA-219ENST00000560871 A0A087WZY1 265 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 AGAP5A6NIR3 686 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 CLDN24A6NM45 220 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 BBIP1A8MTZ0 92 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 SHISA8B8ZZ34 492 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 ZNF264O43296 627 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 EIF4E2O60573 245 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 DNAJA2O60884 412 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 LINGO3P0C6S8 592 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 GABRA1P14867 456 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 CPN1P15169 458 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 ZNF708P17019 499 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 GPX2P18283 190 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 PSMA4P25789 261 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 HTR1EP28566 365 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 GCKP35557 465 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 CLDN18P56856 261 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 NFYCQ13952 458 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 SELPLGQ14242 412 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 MAPRE2Q15555 327 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 ACSF3Q4G176 576 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 C1orf185Q5T7R7 199 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 REP15Q6BDI9 236 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 SNX32Q86XE0 403 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 TOR1AIP2Q8NFQ8 470 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 OR5M1Q8NGP8 315 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 POC1BQ8TC44 478 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 PMM1Q92871 262 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 MAL2Q969L2 176 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 ZBTB8AQ96BR9 441 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 ZNF524Q96C55 264 aa14.01□□□□□ -0.17
RABGGTA-219ENST00000560871 ARSGQ96EG1 525 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms