RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 GABRA1P14867 456 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 CHMP24386 653 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 CA7P43166 264 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 UQCRFS1P47985 274 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 ERFP50548 548 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 NFYCQ13952 458 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 FLOT2Q14254 428 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 GPAT3Q53EU6 434 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 ENPP6Q6UWR7 440 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 DHDDSQ86SQ9 333 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 ZGRF1Q86YA3 2104 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 FAM26EQ8N5C1 309 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 FAM156AQ8NDB6 213 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 OR2M3Q8NG83 312 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 PYDC1Q8WXC3 89 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 RAB8BQ92930 207 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 TP63Q9H3D4 680 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 MTHFD2LQ9H903 347 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 CACYBPQ9HB71 228 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC25A37Q9NYZ2 338 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 DKKL1Q9UK85 242 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 RP1L1Q8IWN7 2480 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 C7orf72A4D263 438 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 CLEC18AA5D8T8 446 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 FAM47E-STBD1D6RA91 191 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 WDR1O75083 606 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 UGT2B17O75795 530 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 ZNF17P17021 662 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 DPP4P27487 766 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 CAPRIN1Q14444 709 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 TOMM20Q15388 145 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 GPR68Q15743 365 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 RUNDC3AQ59EK9 446 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 TYW3Q6IPR3 259 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 CLEC18BQ6UXF7 455 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 APOOLQ6UXV4 268 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 FRRS1Q6ZNA5 592 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 ZAR1Q86SH2 424 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 MARCH3Q86UD3 253 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC30A8Q8IWU4 369 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 CHERPQ8IWX8 916 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 CLEC18CQ8NCF0 446 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 OR14L1PQ8NHC6 308 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC26A7Q8TE54 656 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 PHF10Q8WUB8 498 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 ZBTB8AQ96BR9 441 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 C1GALT1C1Q96EU7 318 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 ANKRD27Q96NW4 1050 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 CGREF1Q99674 301 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 PIGQQ9BRB3 760 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 SPATA9Q9BWV2 254 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 TMEM38AQ9H6F2 299 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 A4GALTQ9NPC4 353 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 FBXO34Q9NWN3 711 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 FLRT3Q9NZU0 649 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 SLAMF8Q9P0V8 285 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 GMPR2Q9P2T1 348 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 OSGIN2Q9Y236 505 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 AP3M1Q9Y2T2 418 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 NBASA2RRP1 2371 aa12.71□□□□□ -0.37
PKNOX1-209ENST00000560448 DSPPQ9NZW4 1301 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 C15orf38-AP3S2A0A0A6YYH1 394 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 A0A0G2JPF8 293 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 SERINC4A6NH21 518 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 AGAP5A6NIR3 686 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 HNRNPCL2B2RXH8 293 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 E9PLN8 166 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF264O43296 627 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 FCMRO60667 390 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 H6PDO95479 791 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 DBIP07108 87 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 TFPTP0C1Z6 253 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 ADH6P28332 368 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 EIF1P41567 113 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 P2RX1P51575 399 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF41P51814 821 aaPredicted RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 EEFSECP57772 596 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 RBBP4Q09028 425 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 FUT5Q11128 374 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 FGFBP1Q14512 234 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 BCL2A1Q16548 175 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 GTDC1Q4AE62 458 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 COX20Q5RI15 118 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 ARPINQ7Z6K5 226 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 GALNT10Q86SR1 603 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms