RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZDHHC2Q9UIJ5 367 aa12.66□□□□□ -0.38
TPM1-223ENST00000560445 RAP2CQ9Y3L5 183 aa12.66□□□□□ -0.38
TPM1-223ENST00000560445 RNASET2O00584 256 aaKnown RBP12.65□□□□□ -0.38
TPM1-223ENST00000560445 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 GMFGO60234 142 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 EIF4E2O60573 245 aaKnown RBP12.65□□□□□ -0.38
TPM1-223ENST00000560445 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
TPM1-223ENST00000560445 C6orf47O95873 294 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 FOSL1P15407 271 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 UGT2B10P36537 528 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 KIR2DL2P43627 348 aaPredicted RBP12.65□□□□□ -0.38
TPM1-223ENST00000560445 SUCLG1P53597 346 aaKnown RBP12.65□□□□□ -0.38
TPM1-223ENST00000560445 ATP12AP54707 1039 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 TXNL4AP83876 142 aaKnown RBP12.65□□□□□ -0.38
TPM1-223ENST00000560445 HPCAP84074 193 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 ZNF844Q08AG5 666 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 CHI3L2Q15782 390 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 DEFB113Q30KQ7 82 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 PGS1Q32NB8 556 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 HBMQ6B0K9 141 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 APOOLQ6UXV4 268 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 GGNQ86UU5 652 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 GATSQ8NAP1 163 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 OR5M1Q8NGP8 315 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 NRGNQ92686 78 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 PIGTQ969N2 578 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 C16orf58Q96GQ5 468 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 RNF145Q96MT1 663 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 RTN4RQ9BZR6 473 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 DPY30Q9C005 99 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 POLE3Q9NRF9 147 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 RAB21Q9UL25 225 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 DTNAQ9Y4J8 743 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 MTORP42345 2549 aa12.65□□□□□ -0.38
TPM1-223ENST00000560445 WDR91A4D1P6 747 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 C17orf51A8MQB3 221 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 B4DXG7 233 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 STX11O75558 287 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 ATE1O95260 518 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 G6PDP11413 515 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 UBL4AP11441 157 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 CREB1P16220 341 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 IL11P20809 199 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 SLC7A1P30825 629 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 RPL14P50914 215 aaKnown RBP12.64□□□□□ -0.39
TPM1-223ENST00000560445 NR1H2P55055 460 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 CARD18P57730 90 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 SELENBP1Q13228 472 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 CBFBQ13951 182 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 GUSBP1Q15486 140 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 PDCD2Q16342 344 aaPredicted RBP12.64□□□□□ -0.39
TPM1-223ENST00000560445 KLHL26Q53HC5 615 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 CCNJQ5T5M9 372 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 C20orf204Q6ZNR8 217 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 C16orf62Q7Z3J2 963 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 LILRA2Q8N149 483 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 TMCO5AQ8N6Q1 288 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 ZNF614Q8N883 585 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 OR8J2Q8NGG1 315 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 TMEM234Q8WY98 164 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 SLC35G5Q96KT7 338 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 OPN3Q9H1Y3 402 aaPredicted RBP12.64□□□□□ -0.39
TPM1-223ENST00000560445 CXorf36Q9H7Y0 433 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 SERINC1Q9NRX5 453 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 GPATCH2Q9NW75 528 aa12.64□□□□□ -0.39
TPM1-223ENST00000560445 RNF103-CHMP3A0A140T963 221 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 ZNF264O43296 627 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 TMCC2O75069 709 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 ERLIN1O75477 346 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 GUSBP08236 651 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 LBPP18428 481 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 KLK2P20151 261 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 EFNA1P20827 205 aaPredicted RBP12.63□□□□□ -0.39
TPM1-223ENST00000560445 CRYGSP22914 178 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 FKBP2P26885 142 aaKnown RBP12.63□□□□□ -0.39
TPM1-223ENST00000560445 SLC1A6P48664 564 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 HBA1P69905 142 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 TMEM201Q5SNT2 666 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 HHATQ5VTY9 493 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 SHEQ5VZ18 495 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 SSX8Q7RTT4 187 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 GALNT10Q86SR1 603 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 SLC43A2Q8N370 569 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 KRTCAP2Q8N6L1 136 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 OR4A15Q8NGL6 344 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 TESCQ96BS2 214 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 C3orf30Q96M34 536 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 OR7D2Q96RA2 312 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 PIP5K1AQ99755 562 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms