RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PTDSS1P48651 473 aaKnown RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 CLDN8P56748 225 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 MRPS35P82673 323 aaKnown RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 FOXD4Q12950 439 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 CEACAM7Q14002 265 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 CCNIQ14094 377 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 KEAP1Q14145 624 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 WDSUB1Q8N9V3 476 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 BHLHE22Q8NFJ8 381 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 RNF138Q8WVD3 245 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 POP5Q969H6 163 aaKnown RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 SFXN2Q96NB2 322 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 DACH2Q96NX9 599 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 PRPF18Q99633 342 aaKnown RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 TAS2R10Q9NYW0 307 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 ABCD2Q9UBJ2 740 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 NKX1-2Q9UD57 310 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-214ENST00000560402 DKKL1Q9UK85 242 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 PACSIN3Q9UKS6 424 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 DLGAP4Q9Y2H0 992 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 GNG14A0A1W2PPG7 69 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 PLOD3O60568 738 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 TSPAN2O60636 221 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 CRHP06850 196 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 BCKDHAP12694 445 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 ZNF708P17019 499 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 TIA1P31483 386 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMAD3-214ENST00000560402 S100A3P33764 101 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 HPCAL1P37235 193 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 PCYT1AP49585 367 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 LHX2P50458 406 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 PNLIPRP2P54317 469 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 LRRC74AQ0VAA2 488 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 BCL2A1Q16548 175 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 DESI1Q6ICB0 168 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 OR2A2Q6IF42 318 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 GALNT18Q6P9A2 607 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 DHFR2Q86XF0 187 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 GRAMD2AQ8IUY3 354 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 SIMC1Q8NDZ2 872 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 HIPK4Q8NE63 616 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 OR9A2Q8NGT5 310 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 VPS33AQ96AX1 596 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 ITCHQ96J02 903 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 TACO1Q9BSH4 297 aaKnown RBP12.29□□□□□ -0.44
SMAD3-214ENST00000560402 VCXQ9H320 206 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 DLL4Q9NR61 685 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 ACANP16112 2415 aa12.29□□□□□ -0.44
SMAD3-214ENST00000560402 SH3D21A4FU49 640 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 PLOD2O00469 737 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 HRGP04196 525 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 CT45A8P0DMV1 189 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 CT45A9P0DMV2 189 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 TCN1P20061 433 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-214ENST00000560402 MPIP34949 423 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 AGFG1P52594 562 aaKnown RBP12.28□□□□□ -0.44
SMAD3-214ENST00000560402 SRYQ05066 204 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 FOXF2Q12947 444 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 GANABQ14697 944 aaKnown RBP12.28□□□□□ -0.44
SMAD3-214ENST00000560402 FAM174BQ3ZCQ3 159 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 CT45A2Q5DJT8 189 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 NOXRED1Q6NXP6 359 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 LUZP2Q86TE4 346 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 CCDC116Q8IYX3 515 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 OR4K17Q8NGC6 315 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 OR8J3Q8NGG0 315 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 EXOSC8Q96B26 276 aaKnown RBP12.28□□□□□ -0.44
SMAD3-214ENST00000560402 TESCQ96BS2 214 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 OR52E6Q96RD3 313 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 ADOQ96SZ5 270 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 KCTD14Q9BQ13 255 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-214ENST00000560402 G6PC3Q9BUM1 346 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 PLEKHF2Q9H8W4 249 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 FOLH1BQ9HBA9 442 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 SLC35C2Q9NQQ7 365 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 SIRT5Q9NXA8 310 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 ABCG2Q9UNQ0 655 aa12.28□□□□□ -0.44
SMAD3-214ENST00000560402 NIPBLQ6KC79 2804 aaeCLIP12.27□□□□□ -0.44
SMAD3-214ENST00000560402 A0A087WV62 115 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 AQP12BA6NM10 295 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 MSTNO14793 375 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 ANKRD28O15084 1053 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 PGRP06401 933 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 IFI6P09912 130 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 SLC6A2P23975 617 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 DPP4P27487 766 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 DSCR4P56555 118 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-214ENST00000560402 CLDN18P56856 261 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 ADAM8P78325 824 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 RAE1P78406 368 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms