RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	SF3B6	Q9Y3B4	125 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RPL36	Q9Y3U8	105 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CLCA3P	Q9Y6N3	262 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	A3GALT2	U3KPV4	340 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MED12	Q93074	2177 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	PI4KA	P42356	2102 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TRAV27	A0A087WT01	109 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369		A0A0A6YYC8	382 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369		A0A0B4J293	547 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	C2orf92	A0A1B0GVN3	265 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	C4orf47	A7E2U8	309 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	C17orf51	A8MQB3	221 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CENPBD1	B2RD01	187 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369		B4DGG1	531 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	LRRN3	E7EW58	273 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SMLR1	H3BR10	107 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369		I3L1I5	382 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MEN1	O00255	615 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SURF4	O15260	269 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	B3GALT2	O43825	422 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MPZL2	O60487	215 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	ALX3	O95076	343 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	APBB3	O95704	486 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SEMA4F	O95754	770 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RAB36	O95755	333 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	NGFR	P08138	427 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	IFI30	P13284	250 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	IL9	P15248	144 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SDC2	P34741	201 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GABRA3	P34903	492 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	DDOST	P39656	456 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HCCS	P53701	268 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	BTG2	P78543	158 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TSPAN31	Q12999	210 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	KRR1	Q13601	381 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	FZD2	Q14332	565 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TRAM2	Q15035	370 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	PRICKLE4	Q2TBC4	344 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GXYLT1	Q4G148	440 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CEP78	Q5JTW2	689 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	DCST2	Q5T1A1	773 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SLC27A4	Q6P1M0	643 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CPO	Q8IVL8	374 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CA13	Q8N1Q1	262 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GHDC	Q8N2G8	530 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RFLNB	Q8N5W9	214 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZNF485	Q8NCK3	441 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TEX47	Q8TBZ9	253 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GNPDA2	Q8TDQ7	276 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GRHL3	Q8TE85	626 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CNOT9	Q92600	299 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	NACC2	Q96BF6	587 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZNF524	Q96C55	264 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TOE1	Q96GM8	510 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MS4A4E	Q96PG1	132 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SERINC2	Q96SA4	455 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TIMP4	Q99727	224 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZFYVE21	Q9BQ24	234 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GPR174	Q9BXC1	333 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HDHD5	Q9BXW7	423 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	LRRN3	Q9H3W5	708 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TRIM45	Q9H8W5	580 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RPRD1B	Q9NQG5	326 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	NDUFB11	Q9NX14	153 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	LYAR	Q9NX58	379 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MAT2B	Q9NZL9	334 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HCN3	Q9P1Z3	774 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	PLEKHB1	Q9UF11	243 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CBLC	Q9ULV8	474 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	DIMT1	Q9UNQ2	313 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TMEM184B	Q9Y519	407 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HEBP2	Q9Y5Z4	205 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HYKK	A2RU49	373 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	OR6C70	A6NIJ9	312 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	MYL12B	O14950	172 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	AKR7A2	O43488	359 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	REM1	O75628	298 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	SNX4	O95219	450 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	CBX7	O95931	251 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	GYPB	P06028	91 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	NOS3	P29474	1203 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	ETV6	P41212	452 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	HTR2B	P41595	481 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	MTNR1A	P48039	350 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	SMS	P52788	366 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	FOXL2	P58012	376 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	UBE2I	P63279	158 aa	Known RBP	5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	HNRNPA0	Q13151	305 aa	Known RBP	5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	CCIN	Q13939	588 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	GAS6	Q14393	721 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	KIR2DS3	Q14952	304 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	SUZ12	Q15022	739 aa	Known RBP	5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	OR1Q1	Q15612	314 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	ARHGAP11B	Q3KRB8	267 aa		5.34	□□□□□ -1.55
LRRC49-223	ENST00000560369	AADACL4	Q5VUY2	407 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms