RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 SHC1P29353 583 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 SFTPDP35247 375 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ATP5J2P56134 94 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ZNF844Q08AG5 666 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ZNF239Q16600 458 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 GALNTL6Q49A17 601 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 TMEM201Q5SNT2 666 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 KANK2Q63ZY3 851 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 R3HCC1LQ7Z5L2 792 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 TDRPQ86YL5 185 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 GSPT2Q8IYD1 628 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 STEAP2Q8NFT2 490 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 RNF128Q8TEB7 428 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 FAM120BQ96EK7 910 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 CHMP6Q96FZ7 201 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 REXO5Q96IC2 774 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 STACQ99469 402 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 GATA5Q9BWX5 397 aaPredicted RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 TIGARQ9NQ88 270 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 DUSP22Q9NRW4 184 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 SIRT3Q9NTG7 399 aaPredicted RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 MID2Q9UJV3 735 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 KIAA1324LA8MWY0 1029 aaPredicted RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 KIF2AO00139 706 aaPredicted RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 HMGN2P05204 90 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 BCKDHAP12694 445 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 NID1P14543 1247 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 KRT4P19013 534 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ELK4P28324 431 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ZNF117Q03924 483 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 FOXF1Q12946 379 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 LASP1Q14847 261 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 RNPS1Q15287 305 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ALKBH2Q6NS38 261 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 LRIG3Q6UXM1 1119 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 MTERF4Q7Z6M4 381 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 HOMEZQ8IX15 550 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 KIF18AQ8NI77 898 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 PHOSPHO1Q8TCT1 267 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 ABHD3Q8WU67 409 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 AKAP1Q92667 903 aaKnown RBP eCLIP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 CPNE4Q96A23 557 aaPredicted RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 S100PBPQ96BU1 408 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 TACO1Q9BSH4 297 aaKnown RBP15.51■□□□□ 0.07
CRTC3-208ENST00000560098 HDHD5Q9BXW7 423 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 PIGUQ9H490 435 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 PPCSQ9HAB8 311 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 HIVEP2P31629 2446 aa15.51■□□□□ 0.07
CRTC3-208ENST00000560098 HEATR5AQ86XA9 2040 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 SMIM23A6NLE4 172 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 TRIM13O60858 407 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 GCM2O75603 506 aaPredicted RBP15.5■□□□□ 0.07
CRTC3-208ENST00000560098 ATP6V1C1P21283 382 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 ADH6P28332 368 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 HPCAL1P37235 193 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 PCLAFQ15004 111 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 CBLN3Q6UW01 205 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 TFAP2EQ6VUC0 442 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 TUSC5Q8IXB3 177 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 DDIASQ8IXT1 998 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 C4orf33Q8N1A6 199 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 GABRG1Q8N1C3 465 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 RAB3IL1Q8TBN0 382 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 CDS1Q92903 461 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 SRXN1Q9BYN0 137 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 HOXD1Q9GZZ0 328 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 GIN1Q9NXP7 522 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 KLHL13Q9P2N7 655 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 ATP6V1HQ9UI12 483 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 LAMP3Q9UQV4 416 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 SNX8Q9Y5X2 465 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 TLN2Q9Y4G6 2542 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 ROS1P08922 2347 aa15.5■□□□□ 0.07
CRTC3-208ENST00000560098 GJE1A6NN92 205 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 TMEM114B3SHH9 223 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 ZNF195O14628 629 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 SCAMP2O15127 329 aaKnown RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 EFNA2O43921 213 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 NUDT14O95848 222 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 FGF4P08620 206 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 P2RX1P51575 399 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 RPS4XP62701 263 aaKnown RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 CAPRIN1Q14444 709 aaKnown RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 KLHL26Q53HC5 615 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 ADAM5Q6NVV9 412 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 CDC73Q6P1J9 531 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 NUFIP2Q7Z417 695 aaKnown RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 ZNF527Q8NB42 609 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 FBXO27Q8NI29 283 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 EPS8L3Q8TE67 593 aaKnown RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 TWIST2Q8WVJ9 160 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 UBLCP1Q8WVY7 318 aaPredicted RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 MDFIQ99750 246 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 GP6Q9HCN6 339 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 ICAM5Q9UMF0 924 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 CARD8Q9Y2G2 431 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 RNF115Q9Y4L5 304 aa15.49■□□□□ 0.07
CRTC3-208ENST00000560098 GPC6Q9Y625 555 aaPredicted RBP15.49■□□□□ 0.07
CRTC3-208ENST00000560098 TMEM233B4DJY2 109 aa15.48■□□□□ 0.07
CRTC3-208ENST00000560098 H3BNH8 94 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms