RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GPR83Q9NYM4 423 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 LOC285095A0A1B0GVY8 99 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 WNT10BO00744 389 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 CLDN7O95471 211 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 HOXB5P09067 269 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 GIMAP1Q8WWP7 306 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ADIPOR1Q96A54 375 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 GPR22Q99680 433 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 DHRS9Q9BPW9 319 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 F5H5K5 113 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 CSN1S1P47710 185 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 PPP2CAP67775 309 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 UNC5DQ6UXZ4 953 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 TMEM200AQ86VY9 491 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ENDOVQ8N8Q3 282 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZCCHC4Q9H5U6 513 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 NT5DC2Q9H857 520 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 SEC14L5O43304 696 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 DRD2P14416 443 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 RPS21P63220 83 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF648Q5T619 568 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 GON7Q9BXV9 100 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 NXF5Q9H1B4 397 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 TMEM98Q9Y2Y6 226 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 USF1P22415 310 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 RAC1P63000 192 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 SRPXP78539 464 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 GDPGP1Q6ZNW5 385 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 CHAC2Q8WUX2 184 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 CPNE4Q96A23 557 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 MYADMQ96S97 322 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 FTSJ1Q9UET6 329 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 PADI3Q9ULW8 664 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 DBHP09172 617 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 RNH1P13489 461 aaKnown RBP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ETV4P43268 484 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 DLX3O60479 287 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 MTX2O75431 263 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 MT-ND4LP03901 98 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 DHRS4L1P0CG22 281 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 HLCSP50747 726 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 MGAT3Q09327 533 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 AADACL3Q5VUY0 350 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 MEIS3P1A6NDR6 274 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CBX7O95931 251 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF28P17035 718 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 IL2RGP31785 369 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 EPHA4P54764 986 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZFAND4Q86XD8 727 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CPNE8Q86YQ8 564 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ADAM12O43184 909 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 TYRP14679 529 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 TGM4P49221 684 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 SEC61A1P61619 476 aaKnown RBP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 GLO1Q04760 184 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 GPR19Q15760 415 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ADIRFQ15847 76 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ENPP6Q6UWR7 440 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CNTN4Q8IWV2 1026 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 KLHDC7BQ96G42 594 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 GPR20Q99678 358 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC17A6Q9P2U8 582 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 HPGDSO60760 199 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 MBP02144 154 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CPN1P15169 458 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 BIDP55957 195 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CDK5Q00535 292 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF266Q14584 549 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 TIFABQ6ZNK6 161 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 KCNA7Q96RP8 456 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZDHHC11Q9H8X9 412 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 GAB2Q9UQC2 676 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CDK4P11802 303 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 IL3RAP26951 378 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 CHRNEQ04844 493 aa13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 NOL4LQ96MY1 436 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 C11orf84Q9BUA3 381 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P12-202ENST00000559989 SEMA4CQ9C0C4 833 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms