RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 B4E171 279 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 POLR1CO15160 346 aaPredicted RBP16.45■□□□□ 0.22
SNX1-208ENST00000559844 FMO6PO60774 539 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 PRAMEF2O60811 474 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 CNOT3O75175 753 aaKnown RBP16.45■□□□□ 0.22
SNX1-208ENST00000559844 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
SNX1-208ENST00000559844 GALNSP34059 522 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 TSPAN7P41732 249 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 STAT5AP42229 794 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 SLC15A1P46059 708 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 STT3AP46977 705 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 OMPP47874 163 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 GIPRP48546 466 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 FOXC1Q12948 553 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 IL11RAQ14626 422 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 SLC25A30Q5SVS4 291 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 FIGNL1Q6PIW4 674 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 MBOAT2Q6ZWT7 520 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 PPP1R3BQ86XI6 285 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 FAM26EQ8N5C1 309 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 IL4I1Q96RQ9 567 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 FBXO8Q9NRD0 319 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 C14orf105Q9NVL8 296 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 SELENONQ9NZV5 590 aa16.45■□□□□ 0.22
SNX1-208ENST00000559844 HEMK1Q9Y5R4 338 aaPredicted RBP16.45■□□□□ 0.22
SNX1-208ENST00000559844 SEC16AO15027 2179 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 GXYLT2A0PJZ3 443 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 TRAPPC13A5PLN9 417 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 TTC36A6NLP5 189 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 ENTPD6O75354 484 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 FPR3P25089 353 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 ETV5P41161 510 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 PCYT1AP49585 367 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 ZNF136P52737 540 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 DCTN2Q13561 401 aaKnown RBP16.44■□□□□ 0.22
SNX1-208ENST00000559844 SERTAD2Q14140 314 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 MAPK14Q16539 360 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 MRPL2Q5T653 305 aaKnown RBP16.44■□□□□ 0.22
SNX1-208ENST00000559844 MFSD4BQ5TF39 518 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 OR51Q1Q8NH59 317 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 PMEPA1Q969W9 287 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 GPA33Q99795 319 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 SH3GL3Q99963 347 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 TVP23BQ9NYZ1 205 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 TESQ9UGI8 421 aaKnown RBP16.44■□□□□ 0.22
SNX1-208ENST00000559844 CENPVL1A0A0U1RR11 272 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 CDHR4A6H8M9 788 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 H3BMH7 237 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 KCNK2O95069 426 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 CD36P16671 472 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 EMDP50402 254 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 HOXC5Q00444 222 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 AQP6Q13520 282 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 SPCS2Q15005 226 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 TIGD6Q17RP2 521 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 ZSWIM7Q19AV6 140 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 PRAMEF17Q5VTA0 474 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 PLAG1Q6DJT9 500 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 ZNF367Q7RTV3 350 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 NKAIN4Q8IVV8 208 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 TCEANCQ8N8B7 351 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 RNF31Q96EP0 1072 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 FBXO34Q9NWN3 711 aa16.44■□□□□ 0.22
SNX1-208ENST00000559844 FER1L5A0AVI2 2057 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 TGFBR3LH3BV60 316 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 TIAF1O95411 115 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 ADORA3P0DMS8 318 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 FGF5P12034 268 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 LSM11P83369 360 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNX1-208ENST00000559844 PSG6Q00889 435 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 SYT16Q17RD7 645 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 FLYWCH1Q4VC44 716 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 SLC27A4Q6P1M0 643 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 BPHLQ86WA6 291 aaPredicted RBP16.43■□□□□ 0.22
SNX1-208ENST00000559844 DTNBP1Q96EV8 351 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 MVB12AQ96EY5 273 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 FAM46AQ96IP4 442 aaKnown RBP16.43■□□□□ 0.22
SNX1-208ENST00000559844 TEX12Q9BXU0 123 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 CUTCQ9NTM9 273 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 KCNE5Q9UJ90 142 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNX1-208ENST00000559844 SLC7A7Q9UM01 511 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 NTNG1Q9Y2I2 539 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 NINQ8N4C6 2090 aa16.43■□□□□ 0.22
SNX1-208ENST00000559844 PEX12O00623 359 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 CDC123O75794 336 aaPredicted RBP16.42■□□□□ 0.22
SNX1-208ENST00000559844 THY1P04216 161 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 TGFBR2P37173 567 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 RAB15P59190 212 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 BTG2P78543 158 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 ZNF267Q14586 743 aaPredicted RBP16.42■□□□□ 0.22
SNX1-208ENST00000559844 NCF4Q15080 339 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 PWWP2BQ6NUJ5 590 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 MRGPREQ86SM8 312 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 KIF18BQ86Y91 864 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 RNF113BQ8IZP6 322 aaKnown RBP16.42■□□□□ 0.22
SNX1-208ENST00000559844 IQCF1Q8N6M8 205 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 C7orf57Q8NEG2 295 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 TBC1D15Q8TC07 691 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 OSTF1Q92882 214 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms