RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CLEC18AA5D8T8 446 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 CLDN24A6NM45 220 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 HNRNPCL2B2RXH8 293 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 HNRNPCL3B7ZW38 293 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 LRRTM2O43300 516 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 EIF4E2O60573 245 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 HNRNPCL1O60812 293 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 BCAS1O75363 584 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 HNRNPCL4P0DMR1 293 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 RPS4Y1P22090 263 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 GFRA1P56159 465 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 KCNJ10P78508 379 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 CRYZQ08257 329 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 GANABQ14697 944 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 C4orf17Q53FE4 359 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 NHSL2Q5HYW2 709 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 CLEC18BQ6UXF7 455 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 PCYOX1LQ8NBM8 494 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 CLEC18CQ8NCF0 446 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 ABTB1Q969K4 478 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 DTNBP1Q96EV8 351 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 UGT2B28Q9BY64 529 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 LAT2Q9GZY6 243 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 KAT8Q9H7Z6 458 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 BCL2L10Q9HD36 194 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 PNPLA3Q9NST1 481 aa18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 ERRFI1Q9UJM3 462 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-207ENST00000559494 TMEM247A6NEH6 219 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 BCKDKO14874 412 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF264O43296 627 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 CSTAP01040 98 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 UBL4AP11441 157 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 PGM1P36871 562 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 GZMMP51124 257 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 P2RX1P51575 399 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 CDK6Q00534 326 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 PLAURQ03405 335 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 GNA13Q14344 377 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 GLYR1Q49A26 553 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 DCST1Q5T197 706 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 C3P1Q6ZMU1 363 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 EIF3MQ7L2H7 374 aaKnown RBP18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 FJX1Q86VR8 437 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 IFNEQ86WN2 208 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 PTOV1Q86YD1 416 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 ANKS4BQ8N8V4 417 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 OR5M1Q8NGP8 315 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 NFKBIDQ8NI38 313 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF524Q96C55 264 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 NPAS1Q99742 590 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 TMEM38AQ9H6F2 299 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 MED17Q9NVC6 651 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 GID8Q9NWU2 228 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 SLC5A6Q9Y289 635 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 LRRK2Q5S007 2527 aa18.38■□□□□ 0.53
TSPAN3-207ENST00000559494 A0A1B0GUH1 482 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 SHISA8B8ZZ34 492 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 AIM2O14862 343 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 PGM3O95394 542 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 ACTL6AO96019 429 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 DBIP07108 87 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 STARP49675 285 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 CASP6P55212 293 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 SKP2Q13309 424 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 TMEM44Q2T9K0 475 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 RABL3Q5HYI8 236 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 WLSQ5T9L3 541 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 PRAMEF8Q5VWM4 474 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 PRAMEF7Q5VXH5 474 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 PEX5LQ8IYB4 626 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 METTL25Q8N6Q8 603 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 FAM71CQ8NEG0 241 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 OR52P1PQ8NH57 321 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 OR10A6Q8NH74 314 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 GPR119Q8TDV5 335 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 WDYHV1Q96HA8 205 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 SFXN2Q96NB2 322 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 VDAC3Q9Y277 283 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 SLC35A3Q9Y2D2 325 aa18.37■□□□□ 0.53
TSPAN3-207ENST00000559494 SPTBN1Q01082 2364 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 A0A087WZY1 265 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 OR2M5A3KFT3 312 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 CCL21O00585 134 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 CYP7B1O75881 506 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 UBTFL6P0CB48 400 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 CHMP24386 653 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 PRDX6P30041 224 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 SUMO3P55854 103 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 TOMM34Q15785 309 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 PLPPR5Q32ZL2 321 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 GKAP1Q5VSY0 366 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 REEP3Q6NUK4 255 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF585AQ6P3V2 769 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 NET1Q7Z628 596 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 VRK2Q86Y07 508 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 OR8J3Q8NGG0 315 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 OR5W2Q8NH69 310 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 CNOT9Q92600 299 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 CMTM5Q96DZ9 223 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms