RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TMEM252Q8N6L7 170 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 DNAJA4Q8WW22 397 aaPredicted RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 MYDGFQ969H8 173 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 SLC30A2Q9BRI3 323 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 CHIAQ9BZP6 476 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 THAP9Q9H5L6 903 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 NARFLQ9H6Q4 476 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 NANSQ9NR45 359 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 MMP26Q9NRE1 261 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 ANO10Q9NW15 660 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 PAK1IP1Q9NWT1 392 aaPredicted RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 UTP6Q9NYH9 597 aaKnown RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 UBQLN1Q9UMX0 589 aaKnown RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 SCML2Q9UQR0 700 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 RNF6Q9Y252 685 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 ZNFX1Q9P2E3 1918 aaKnown RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 PSMB11A5LHX3 300 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 LRRC30A6NM36 301 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 K7N7A8 449 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 AKR7A3O95154 331 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 HBQ1P09105 142 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 SERPINA2P20848 420 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 DPP4P27487 766 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 AQP1P29972 269 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 NMT1P30419 496 aaKnown RBP2.24□□□□□ -2.05
VPS13C-207ENST00000558919 CTRLP40313 264 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 PPOXP50336 477 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 ST3GAL3Q11203 375 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 EBI3Q14213 229 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 GAMTQ14353 236 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 KCTD19Q17RG1 926 aaPredicted RBP2.24□□□□□ -2.05
VPS13C-207ENST00000558919 TMEM52BQ4KMG9 183 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 ARMCX2Q7L311 632 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 EFCAB13Q8IY85 973 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 ZNF713Q8N859 430 aaPredicted RBP2.24□□□□□ -2.05
VPS13C-207ENST00000558919 C20orf203Q8NBC4 194 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 SUMF2Q8NBJ7 301 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 OR56B1Q8NGI3 324 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 BLOC1S5Q8TDH9 187 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 OR1E3Q8WZA6 343 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 STARD4Q96DR4 205 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 SDSLQ96GA7 329 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 ARHGDIGQ99819 225 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 CHRDL1Q9BU40 450 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 SRXN1Q9BYN0 137 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 NXF3Q9H4D5 531 aaKnown RBP2.24□□□□□ -2.05
VPS13C-207ENST00000558919 CYTL1Q9NRR1 136 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 NUDCQ9Y266 331 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 CACNG2Q9Y698 323 aa2.24□□□□□ -2.05
VPS13C-207ENST00000558919 ZNF705EA8MWA4 302 aaPredicted RBP2.23□□□□□ -2.05
VPS13C-207ENST00000558919 ALPPP05187 535 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 IGHV4-34P06331 123 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 ALPPL2P10696 532 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 CLUP10909 449 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 ANXA3P12429 323 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 NUDT1P36639 197 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 APOC4P55056 127 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 SLC26A5P58743 744 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 NTHL1P78549 312 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 RGS1Q08116 209 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 SYPL1Q16563 259 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 LANCL3Q6ZV70 420 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 ARIH2OSQ8N7S6 290 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 NEIL3Q8TAT5 605 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 GIPC3Q8TF64 312 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 SLC5A11Q8WWX8 675 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 FCGR1BQ92637 280 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 VSTM2LQ96N03 204 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 TBX15Q96SF7 602 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 MBOAT4Q96T53 435 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 MCHR1Q99705 422 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 CITED1Q99966 193 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 RNF126Q9BV68 326 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.23□□□□□ -2.05
VPS13C-207ENST00000558919 AP4B1Q9Y6B7 739 aa2.23□□□□□ -2.05
VPS13C-207ENST00000558919 MTCL1Q9Y4B5 1905 aaKnown RBP2.23□□□□□ -2.05
VPS13C-207ENST00000558919 TRBV6-6A0A0A6YYG2 114 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.22□□□□□ -2.05
VPS13C-207ENST00000558919 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.22□□□□□ -2.05
VPS13C-207ENST00000558919 OR6C65A6NJZ3 312 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 A8MUA0 341 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 NPIPB7O75200 414 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 CSF2P04141 144 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 RRASP10301 218 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 HTR1FP30939 366 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 LINC00315P59091 139 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 AP1B1Q10567 949 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 WASHC5Q12768 1159 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 NDUFA9Q16795 377 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 ARSKQ6UWY0 536 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 UNQ9370/PRO34162Q6UXP9 181 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 FAM220AQ7Z4H9 259 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 ANKRD37Q7Z713 158 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 H1FOOQ8IZA3 346 aaPredicted RBP2.22□□□□□ -2.05
VPS13C-207ENST00000558919 KDM8Q8N371 416 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 ZNF786Q8N393 782 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 C14orf79Q96F83 325 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 TBCDQ9BTW9 1192 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 MRPL39Q9NYK5 338 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms