RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GSNP06396 782 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 TUBBP07437 444 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 IL12AP29459 219 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 S100A3P33764 101 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 KIR2DL2P43627 348 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-208ENST00000558827 ATP12AP54707 1039 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
SMAD3-208ENST00000558827 RPS3AP61247 264 aaKnown RBP11.25□□□□□ -0.61
SMAD3-208ENST00000558827 FOXF1Q12946 379 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 TMEM44Q2T9K0 475 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 FAM174BQ3ZCQ3 159 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 PDZK1Q5T2W1 519 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 ANKRD34AQ69YU3 496 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 CROCCP2Q86T23 111 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 KIF18BQ86Y91 864 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 NATD1Q8N6N6 113 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF610Q8N9Z0 462 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 OR10D3Q8NH80 312 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 FAM222BQ8WU58 562 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 XAGE5Q8WWM1 108 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 ROBO4Q8WZ75 1007 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 UCN2Q96RP3 112 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 SDF2Q99470 211 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 INPP5KQ9BT40 448 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 CLEC4MQ9H2X3 399 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-208ENST00000558827 MEAF6Q9HAF1 191 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 ASIC5Q9NY37 505 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 NKIRAS1Q9NYS0 192 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
SMAD3-208ENST00000558827 PRR14LQ5THK1 2151 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 PRSS51A0A1B0GVH4 220 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 A8MXE2 369 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 ANKRD28O15084 1053 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 EFNA2O43921 213 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 NTN1O95631 604 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 NGFRP08138 427 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 KRT16P08779 473 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 EPXP11678 715 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 DNAJA1P31689 397 aaKnown RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 CHI3L1P36222 383 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 CDKN2CP42773 168 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 KCNJ5P48544 419 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 GLYR1Q49A26 553 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 SLC9B1Q4ZJI4 515 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 KLHL26Q53HC5 615 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF474Q6S9Z5 364 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF550Q7Z398 422 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 C16orf62Q7Z3J2 963 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 CAMKMTQ7Z624 323 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 CDC20BQ86Y33 519 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 GTPBP8Q8N3Z3 284 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 GOT1L1Q8NHS2 421 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 PNPT1Q8TCS8 783 aaKnown RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 MOAP1Q96BY2 351 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 TLCD1Q96CP7 247 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 DNAJA3Q96EY1 480 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 ZC3HAV1LQ96H79 300 aaKnown RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 ZFP3Q96NJ6 502 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 MANSC1Q9H8J5 431 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 NEUROD4Q9HD90 331 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 RASSF1Q9NS23 344 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 CCM2LQ9NUG4 571 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-208ENST00000558827 THAP1Q9NVV9 213 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 KLHL28Q9NXS3 571 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 KCNE5Q9UJ90 142 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 PACSIN3Q9UKS6 424 aa11.24□□□□□ -0.61
SMAD3-208ENST00000558827 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 A0A087WZY1 265 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 UQCRHLA0A096LP55 91 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 A0A1W2PQD3 144 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 RNASET2O00584 256 aaKnown RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 SNNO75324 88 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 BCAS1O75363 584 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 UQCRC2P22695 453 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 PSMA4P25789 261 aaKnown RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 ART1P52961 327 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 IST1P53990 364 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 C21orf58P58505 322 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 CASP8Q14790 479 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 MAPK14Q16539 360 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 SMU1Q2TAY7 513 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 CTU2Q2VPK5 515 aaKnown RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 ANXA8L1Q5VT79 327 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 HBMQ6B0K9 141 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 OR2A2Q6IF42 318 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF621Q6ZSS3 439 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 LILRA2Q8N149 483 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 METTL25Q8N6Q8 603 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 OR8J2Q8NGG1 315 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 OR2V1Q8NHB1 315 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 GPR119Q8TDV5 335 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 OSTF1Q92882 214 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 ZG16BQ96DA0 208 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 SLC35A5Q9BS91 424 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms