RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 EDF1O60869 148 aaKnown RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 TNFRSF21O75509 655 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 CRHP06850 196 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 COX6B1P14854 86 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ZNF708P17019 499 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ZNF17P17021 662 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ME2P23368 584 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 OPRM1P35372 400 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 STARP49675 285 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 B3GALT5-AS1P59052 145 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 RPS26P62854 115 aaKnown RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 RAC1P63000 192 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 HPCAP84074 193 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 SRYQ05066 204 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 GPR68Q15743 365 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ZSWIM7Q19AV6 140 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 GPAT3Q53EU6 434 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 C6orf10Q5SRN2 563 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 PDSS1Q5T2R2 415 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 OR2A2Q6IF42 318 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 TNFAIP8L2Q6P589 184 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 BLOC1S3Q6QNY0 202 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 EIF3MQ7L2H7 374 aaKnown RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 ZAR1Q86SH2 424 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ADGRE4PQ86SQ3 457 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 GALNT10Q86SR1 603 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 RNF130Q86XS8 419 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 CCDC71Q8IV32 467 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 CLEC4FQ8N1N0 589 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 GTPBP8Q8N3Z3 284 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 RPRMLQ8N4K4 120 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 OR5D16Q8NGK9 328 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 MBD3L2Q8NHZ7 208 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 TSPEARQ8WU66 669 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ROPN1LQ96C74 230 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 OTUB1Q96FW1 271 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 TRIB1Q96RU8 372 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 INPP5KQ9BT40 448 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 LAT2Q9GZY6 243 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 TPT1P8Q9HAU6 139 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 Q9UFV3 132 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 FOXD3Q9UJU5 478 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 SLC35A3Q9Y2D2 325 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ZNF337Q9Y3M9 751 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 WDR45Q9Y484 360 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 GPC6Q9Y625 555 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 FREM3P0C091 2139 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 GJE1A6NN92 205 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 SYT5O00445 386 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 HMGN4O00479 90 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 UGT2B17O75795 530 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TOXO94900 526 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 RCBTB2O95199 551 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 NUDT14O95848 222 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 CSTAP01040 98 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 GSNP06396 782 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TROVE2P10155 538 aaKnown RBP eCLIP7.66□□□□□ -1.18
TPM1-213ENST00000558400 NR2F1P10589 423 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 NCF2P19878 526 aaPredicted RBP7.66□□□□□ -1.18
TPM1-213ENST00000558400 PPIBP23284 216 aaKnown RBP7.66□□□□□ -1.18
TPM1-213ENST00000558400 CTSSP25774 331 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 FKBP2P26885 142 aaKnown RBP7.66□□□□□ -1.18
TPM1-213ENST00000558400 CLDN18P56856 261 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 FADDQ13158 208 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 CBFBQ13951 182 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 SQLEQ14534 574 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 SGCBQ16585 318 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TMEM44Q2T9K0 475 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 PDZK1Q5T2W1 519 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 GTF2IRD2BQ6EKJ0 949 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ARSKQ6UWY0 536 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 LRRC74BQ6ZQY2 392 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 NCCRP1Q6ZVX7 275 aaPredicted RBP7.66□□□□□ -1.18
TPM1-213ENST00000558400 GTF2IRD2Q86UP8 949 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 CMIPQ8IY22 773 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ZNF619Q8N2I2 560 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ZNF614Q8N883 585 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 GATSQ8NAP1 163 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TNIP2Q8NFZ5 429 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 OR5W2Q8NH69 310 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ZFP90Q8TF47 636 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TMEM234Q8WY98 164 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 GTF2H4Q92759 462 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 RAB8BQ92930 207 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 VPS33AQ96AX1 596 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 SPDL1Q96EA4 605 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ARSGQ96EG1 525 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 SH3YL1Q96HL8 342 aaPredicted RBP7.66□□□□□ -1.18
TPM1-213ENST00000558400 MARK4Q96L34 752 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 MRGPRX4Q96LA9 322 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TUBA1CQ9BQE3 449 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 EBF4Q9BQW3 602 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ENKD1Q9H0I2 346 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 SERHL2Q9H4I8 314 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ARMC7Q9H6L4 198 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 TIGARQ9NQ88 270 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.66□□□□□ -1.18
TPM1-213ENST00000558400 MED17Q9NVC6 651 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ZNF446Q9NWS9 450 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 CCDC167Q9P0B6 97 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms