RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KHDRBS3O75525 346 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 TRMUO75648 421 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 ATP5LO75964 103 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ZBTB11O95625 1053 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 JCHAINP01591 159 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 IGHG3P01860 377 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 MBP02144 154 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 APOA1P02647 267 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 HOXB7P09629 217 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 GSTM3P21266 225 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 GCAP28676 217 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 GNA11P29992 359 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 CDH5P33151 784 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 DCTP40126 519 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 TSFMP43897 325 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 PDLIM4P50479 330 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 OC90Q02509 493 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 PLOD1Q02809 727 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 FASTKQ14296 549 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 TEAD2Q15562 447 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 CD226Q15762 336 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ETFDHQ16134 617 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 FAM83EQ2M2I3 478 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 KIAA1644Q3SXP7 199 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 VPS26BQ4G0F5 336 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 FAHD2BQ6P2I3 314 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 ZNF549Q6P9A3 640 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 PAQR6Q6TCH4 344 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ENPP6Q6UWR7 440 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 RBMS3Q6XE24 437 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 SH2D5Q6ZV89 423 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 STOX1Q6ZVD7 989 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 CYS1Q717R9 158 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 IFNEQ86WN2 208 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 LACC1Q8IV20 430 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 MFSD6LQ8IWD5 586 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 CCDC65Q8IXS2 484 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 LSMEM2Q8N112 164 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 RAB42Q8N4Z0 105 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 STPG4Q8N801 248 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 TMEM178AQ8NBL3 297 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 OR1B1Q8NGR6 318 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 HCAR2Q8TDS4 363 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 CIDECQ96AQ7 238 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 CXorf40BQ96DE9 158 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 FAHD2AQ96GK7 314 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 MSANTD3Q96H12 275 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 FMO2Q99518 471 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 FAM173AQ9BQD7 235 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 OVOL2Q9BRP0 275 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 TEKT3Q9BXF9 490 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 RAB34Q9BZG1 259 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ELOVL6Q9H5J4 265 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 NT5DC2Q9H857 520 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ELL3Q9HB65 397 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 NMRAL1Q9HBL8 299 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ESM1Q9NQ30 184 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 LYARQ9NX58 379 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 TAS2R16Q9NYV7 291 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 SIGLEC8Q9NYZ4 499 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 AHSPQ9NZD4 102 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 KCNG2Q9UJ96 466 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 NOSIPQ9Y314 301 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 AK6Q9Y3D8 172 aaKnown RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 INSRP06213 1382 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 MAP3K19Q56UN5 1328 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 A0A1W2PPV4 95 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 MSGN1A6NI15 193 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ZNF724A8MTY0 619 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 PRAC2D3DTV9 90 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 C11orf98E9PRG8 122 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 PSMD11O00231 422 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 FBP2O00757 339 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ZNF195O14628 629 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 RGS16O15492 202 aaPredicted RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 CLOCKO15516 846 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 E2F6O75461 281 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 CEACAM4O75871 244 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 OR2J3O76001 311 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 OAZ2O95190 189 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 YEATS4O95619 227 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 TMEM50AO95807 157 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 GNA14O95837 355 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 NUDT14O95848 222 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 SNAI1O95863 264 aaPredicted RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 TGM6O95932 706 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ATP1A1P05023 1023 aaKnown RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 SERPIND1P05546 499 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 GTF2E2P29084 291 aaKnown RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 UQCRFS1P47985 274 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 PAX9P55771 341 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 DHODHQ02127 395 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 PAX5Q02548 391 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ZNF85Q03923 595 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 RAB40BQ12829 278 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 MS4A18Q3C1V0 323 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 DMRTC1Q5HYR2 192 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 APOOLQ6UXV4 268 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 LRRC74BQ6ZQY2 392 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 FOXL2NBQ6ZUU3 175 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms