RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ARHGAP11AQ6P4F7 1023 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 GPALPP1Q8IXQ4 340 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF101Q8IZC7 436 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ACBD7Q8N6N7 88 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 C16orf58Q96GQ5 468 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 FCRL1Q96LA6 429 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 CRB3Q9BUF7 120 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 CERS4Q9HA82 394 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ATP13A2Q9NQ11 1180 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 RPS10P5Q9NQ39 176 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 EMC3Q9P0I2 261 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 TRAV18A0A075B6X5 111 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 NPIPA5E9PKD4 350 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 H3BUI4 141 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 AGPAT2O15120 278 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 C1QCP02747 245 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 GALTP07902 379 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 PRR35P0CG20 571 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 AKAIN1P0CW23 69 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 C6P13671 934 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ADRB3P13945 408 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 PRKCAP17252 672 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 S100A2P29034 98 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ERVK-21P61565 698 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 HTR4Q13639 388 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 DUSP6Q16828 381 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 FRMPD2BQ6IN97 320 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 IDO2Q6ZQW0 420 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 FCRLAQ7L513 359 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ASPGQ86U10 573 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 LNX2Q8N448 690 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 PXT1Q8NFP0 134 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 CHTF18Q8WVB6 975 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 PTCHD1Q96NR3 888 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 RNF32Q9H0A6 362 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 CENPMQ9NSP4 180 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 FKBP14Q9NWM8 211 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 PARPBPQ9NWS1 579 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 TAAR2Q9P1P5 351 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 KCNN3Q9UGI6 736 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 MRTO4Q9UKD2 239 aaKnown RBP4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ACSL5Q9ULC5 683 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 SLC6A14Q9UN76 642 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 NPIPA1Q9UND3 350 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 TMEM5Q9Y2B1 443 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 V9GYH0 126 aa4.68□□□□□ -1.66
SYNE2-223ENST00000557005 ANKRD31Q8N7Z5 1873 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 LRRTM2O43300 516 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 TNFSF12O43508 249 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 B4GALT2O60909 372 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 PPM1BO75688 479 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 HCKP08631 526 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 FBXO45P0C2W1 286 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 ARAFP10398 606 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 HOXA9P31269 272 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 MTNR1BP49286 362 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 PDX1P52945 283 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 EPHA5P54756 1037 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 RAE1P78406 368 aaKnown RBP4.67□□□□□ -1.66
SYNE2-223ENST00000557005 DGCR2P98153 550 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 PDE7AQ13946 482 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 RHEBQ15382 184 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 OR1Q1Q15612 314 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 LTB4RQ15722 352 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 USF2Q15853 346 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-223ENST00000557005 DCST2Q5T1A1 773 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 HACD4Q5VWC8 232 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 ULK3Q6PHR2 472 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 TMEM205Q6UW68 189 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 LCTLQ6UWM7 567 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 TMEM150AQ86TG1 271 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 SERINC5Q86VE9 423 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 PRSS58Q8IYP2 241 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 NRSN1Q8IZ57 195 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 RDH10Q8IZV5 341 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 LILRA3Q8N6C8 439 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-223ENST00000557005 TMEM99Q8N816 258 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 OR4K14Q8NGD5 310 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 ABHD4Q8TB40 342 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 WFDC5Q8TCV5 224 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 NEK7Q8TDX7 302 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 CREB3L4Q8TEY5 395 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 C15orf40Q8WUR7 153 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 MYADMQ96S97 322 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 SPNS1Q9H2V7 528 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 OR2S2Q9NQN1 319 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 B3GNT2Q9NY97 397 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 MUTYHQ9UIF7 546 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF225Q9UK10 706 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 C1orf196B1AJZ1 125 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 SCDO00767 359 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 SELENOFO60613 162 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 TPOP07202 933 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 CSF1P09603 554 aa4.67□□□□□ -1.66
SYNE2-223ENST00000557005 APEHP13798 732 aaKnown RBP4.67□□□□□ -1.66
SYNE2-223ENST00000557005 POLR2CP19387 275 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-223ENST00000557005 HOXD9P28356 352 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-223ENST00000557005 AKT2P31751 481 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms