RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 LEF1Q9UJU2 399 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ICAM5Q9UMF0 924 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 RNF6Q9Y252 685 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 VDAC3Q9Y277 283 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 NDUFAF1Q9Y375 327 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 KLF2Q9Y5W3 355 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 GMEB1Q9Y692 573 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 AP4B1Q9Y6B7 739 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 FLNCQ14315 2725 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 C7orf72A4D263 438 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 TMEM247A6NEH6 219 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 H0Y3Z8 333 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 NUDT14O95848 222 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 CSTAP01040 98 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 IL2RAP01589 272 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SNRPB2P08579 225 aaKnown RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 TFPTP0C1Z6 253 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 UBL4AP11441 157 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 ETFAP13804 333 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF17P17021 662 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 HOXB9P17482 250 aaPredicted RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 POU3F2P20265 443 aaPredicted RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 TCEA1P23193 301 aaKnown RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 CHRNB4P30926 498 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 EIF1P41567 113 aaKnown RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 CLDN18P56856 261 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 DSTNP60981 165 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 KCNJ10P78508 379 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SRYQ05066 204 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 FADDQ13158 208 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 CBFBQ13951 182 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 GNA13Q14344 377 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 FGFBP1Q14512 234 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 MAPK14Q16539 360 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 PLPPR5Q32ZL2 321 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 GTDC1Q4AE62 458 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 RIPPLY2Q5TAB7 128 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SP5Q6BEB4 398 aaPredicted RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 EIF3MQ7L2H7 374 aaKnown RBP9.66□□□□□ -0.86
LINC00239-201ENST00000556973 MEIOBQ8N635 442 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 ANKFN1Q8N957 763 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 OR5M1Q8NGP8 315 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 OR5W2Q8NH69 310 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 GPR119Q8TDV5 335 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 ZG16BQ96DA0 208 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 ARSGQ96EG1 525 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 TRIB1Q96RU8 372 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 TUBA1CQ9BQE3 449 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 LAT2Q9GZY6 243 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SLC38A1Q9H2H9 487 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 CHST11Q9NPF2 352 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 MED17Q9NVC6 651 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SLC25A37Q9NYZ2 338 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SLAMF8Q9P0V8 285 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 SLC35A3Q9Y2D2 325 aa9.66□□□□□ -0.86
LINC00239-201ENST00000556973 A0A0G2JNJ9 132 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 A0A0G2JPF8 293 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 AGAP5A6NIR3 686 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HSPB2A8KAH6 182 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 EVPLLA8MZ36 301 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HNRNPCL2B2RXH8 293 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HNRNPCL3B7ZW38 293 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 PRSS44E7EML9 344 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 H3BML4 177 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 ANGPT2O15123 496 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HNRNPCL1O60812 293 aaKnown RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 DNAJA2O60884 412 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 TNFRSF21O75509 655 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 TOXO94900 526 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 DBIP07108 87 aaKnown RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CHRM4P08173 479 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 LINGO3P0C6S8 592 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HNRNPCL4P0DMR1 293 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 BMP2P12643 396 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CD1EP15812 388 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 IL7RP16871 459 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 ADH6P28332 368 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HTR1EP28566 365 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 ADSLP30566 484 aaPredicted RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CEACAM8P31997 349 aaPredicted RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 PGM1P36871 562 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CRISP3P54108 245 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 RAC1P63000 192 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CDSNQ15517 529 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 HSPB2Q16082 182 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 DLEU7Q6UYE1 221 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 SEM1Q6ZVN7 128 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 OLIG3Q7RTU3 272 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 ADGRE4PQ86SQ3 457 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CMIPQ8IY22 773 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 PEX5LQ8IYB4 626 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 GTPBP8Q8N3Z3 284 aaPredicted RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 METTL25Q8N6Q8 603 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 SLC38A5Q8WUX1 472 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 AURKBQ96GD4 344 aaPredicted RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 TM9SF2Q99805 663 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 VAPAQ9P0L0 249 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 Q9UFV3 132 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 CORO2BQ9UQ03 480 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms