RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TNFRSF21O75509 655 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ACTL6AO96019 429 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 TPOP07202 933 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 CHRM4P08173 479 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 SNRPB2P08579 225 aaKnown RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 ETFAP13804 333 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 CPN1P15169 458 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 LSP1P33241 339 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ADH7P40394 386 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 MAP2K3P46734 347 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 CASP6P55212 293 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 PLAURQ03405 335 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 KLF10Q13118 480 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 GANABQ14697 944 aaKnown RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 RGNQ15493 299 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ATAD3BQ5T9A4 648 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 CBLN3Q6UW01 205 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ARSKQ6UWY0 536 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 C3P1Q6ZMU1 363 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 LRRC74BQ6ZQY2 392 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 NCCRP1Q6ZVX7 275 aaPredicted RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 C16orf62Q7Z3J2 963 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 MTERF4Q7Z6M4 381 aaKnown RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 C10orf111Q8N326 155 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 RPRMLQ8N4K4 120 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 GATSQ8NAP1 163 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 PHF10Q8WUB8 498 aaKnown RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 SLC38A5Q8WUX1 472 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 OIT3Q8WWZ8 545 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ABTB1Q969K4 478 aaPredicted RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 WDYHV1Q96HA8 205 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 TP63Q9H3D4 680 aaPredicted RBP8.74□□□□□ -1.01
SRP54-210ENST00000556380 IKZF5Q9H5V7 419 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 HHATLQ9HCP6 504 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 SH3BGRL2Q9UJC5 107 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ACAD8Q9UKU7 415 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 ICAM5Q9UMF0 924 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 FAM215AQ9Y5M1 114 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 NOTCH2Q04721 2471 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 A0A087WZY1 265 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 C15orf38-AP3S2A0A0A6YYH1 394 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 OR2M5A3KFT3 312 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 C7orf72A4D263 438 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 GMNCA6NCL1 334 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ZG16O60844 167 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 BCAS1O75363 584 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 H6PDO95479 791 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ANP32DO95626 131 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 HOXD4P09016 255 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 GPX2P18283 190 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 HK1P19367 917 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 RPS4Y1P22090 263 aaKnown RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 CHMP24386 653 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 PSMA4P25789 261 aaKnown RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 ACVR2AP27037 513 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ADSLP30566 484 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 LHX2P50458 406 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ANXA11P50995 505 aaKnown RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 CLDN15P56746 228 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ZNF117Q03924 483 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 TOMM20Q15388 145 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 GPR68Q15743 365 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 BCL2A1Q16548 175 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ZNF630Q2M218 657 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 RUNDC3AQ59EK9 446 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 PDZK1Q5T2W1 519 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 WLSQ5T9L3 541 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 SEM1Q6ZVN7 128 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ULK2Q8IYT8 1036 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ZNF619Q8N2I2 560 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ZNF527Q8NB42 609 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 FAM71CQ8NEG0 241 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 OR14L1PQ8NHC6 308 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 PHOSPHO1Q8TCT1 267 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ITLN2Q8WWU7 325 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 PMM1Q92871 262 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ARSGQ96EG1 525 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 NPAS1Q99742 590 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ELAC2Q9BQ52 826 aaKnown RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 CPPED1Q9BRF8 314 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 RSPO3Q9BXY4 272 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 EXO5Q9H790 373 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 MED17Q9NVC6 651 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 LEF1Q9UJU2 399 aaPredicted RBP8.73□□□□□ -1.01
SRP54-210ENST00000556380 CARD8Q9Y2G2 431 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 NDUFAF1Q9Y375 327 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 WDR45Q9Y484 360 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ADGRG4Q8IZF6 3080 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 DSPPQ9NZW4 1301 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 CELSR2Q9HCU4 2923 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 ITPR2Q14571 2701 aa8.73□□□□□ -1.01
SRP54-210ENST00000556380 AGAP5A6NIR3 686 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 AHRRA9YTQ3 701 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 KDM4EB2RXH2 506 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 H3BNH8 94 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ETV2O00321 342 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 SLC22A2O15244 555 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 HCRTR2O43614 444 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 SNX3O60493 162 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms