RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 PPICP45877 212 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 IDH2P48735 452 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 PTGES3Q15185 160 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 SMN1Q16637 294 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 SYT6Q5T7P8 510 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 PRSS48Q7RTY5 328 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 OVCH1Q7RTY7 1134 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 RANBP3LQ86VV4 465 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 EGFL6Q8IUX8 553 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 C9orf40Q8IXQ3 194 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 ENTHD1Q8IYW4 607 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 SLC38A4Q969I6 547 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 ADIPOR1Q96A54 375 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 HSPBAP1Q96EW2 488 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 FLRT3Q9NZU0 649 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 SLC7A7Q9UM01 511 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 B3GNT3Q9Y2A9 372 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 PCDHGA10Q9Y5H3 936 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 M0R129 80 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 MEN1O00255 615 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ADAM11O75078 769 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 HBQ1P09105 142 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 DRD5P21918 477 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 PRR22Q8IZ63 422 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 OR1N1Q8NGS0 311 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 FCGR1BQ92637 280 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 POLR2J3Q9H1A7 115 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 FAIMQ9NVQ4 179 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 RNF6Q9Y252 685 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 COL5A1P20908 1838 aaPredicted RBP17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 C2orf92A0A1B0GVN3 265 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 FAM20BO75063 409 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 INMTO95050 263 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 OR5F1O95221 314 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 GUSBP08236 651 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 IFNA8P32881 189 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 CRISP1P54107 249 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ATP12AP54707 1039 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 PIGFQ07326 219 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 EBPQ15125 230 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 OR1Q1Q15612 314 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ZNF141Q15928 474 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 DECR1Q16698 335 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 FAM69BQ5VUD6 431 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ZNF730Q6ZMV8 503 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 PRICKLE2Q7Z3G6 844 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 TMEM255BQ8WV15 326 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 NR4A3Q92570 626 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 LCORQ96JN0 433 aaPredicted RBP17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ARMC7Q9H6L4 198 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 DNAJB12Q9NXW2 375 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ERVK-18Q9QC07 812 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 ENOPH1Q9UHY7 261 aa17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 COL27A1Q8IZC6 1860 aaPredicted RBP17.2■□□□□ 0.34
SDR39U1-218ENST00000556262 HEATR5AQ86XA9 2040 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 TTC36A6NLP5 189 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 OSMP13725 252 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 CTF1Q16619 201 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 NDUFAF6Q330K2 333 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 DESI1Q6ICB0 168 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 C1orf94Q6P1W5 598 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 FAM199XQ6PEV8 388 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 ANKRD37Q7Z713 158 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 ZNF540Q8NDQ6 660 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 APH1BQ8WW43 257 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 YIPF6Q96EC8 236 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 PLCXD1Q9NUJ7 323 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 C14orf105Q9NVL8 296 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 COPS7AQ9UBW8 275 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 CFL2Q9Y281 166 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 H3BN98 237 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 CPNE3O75131 537 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 WBP4O75554 376 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 TP53P04637 393 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 ST13P50502 369 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 CLDN6P56747 220 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 FGFBP1Q14512 234 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 BPHLQ86WA6 291 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 ABTB1Q969K4 478 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 PLEKHA8Q96JA3 519 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 ART5Q96L15 291 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 SIGLEC11Q96RL6 698 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 SPSB2Q99619 263 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 CNIH4Q9P003 139 aa17.19■□□□□ 0.34
SDR39U1-218ENST00000556262 TEX51A0A1B0GUA7 166 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 FRG2CA6NGY1 282 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 VSTM2BA6NLU5 285 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 ZAR1LA6NP61 321 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 ALOX12BO75342 701 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 ONECUT2O95948 504 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 BMXP51813 675 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 MC2RQ01718 297 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 ILKQ13418 452 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 WDR88Q6ZMY6 472 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 NAXDQ8IW45 347 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 LINC00471Q8N535 108 aa17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 ACOT11Q8WXI4 607 aaPredicted RBP17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 FAM46AQ96IP4 442 aaKnown RBP17.18■□□□□ 0.34
SDR39U1-218ENST00000556262 PRSS27Q9BQR3 290 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms