RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 SLC44A3Q8N4M1 653 aa13.87□□□□□ -0.19
CUX1-215ENST00000556210 PFN4Q8NHR9 129 aa13.87□□□□□ -0.19
CUX1-215ENST00000556210 HSPA12BQ96MM6 686 aa13.87□□□□□ -0.19
CUX1-215ENST00000556210 TRIM36Q9NQ86 728 aa13.87□□□□□ -0.19
CUX1-215ENST00000556210 ACSS1Q9NUB1 689 aaPredicted RBP13.87□□□□□ -0.19
CUX1-215ENST00000556210 SCN4AP35499 1836 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 NCOR1O75376 2440 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 ALX3O95076 343 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 PAHP00439 452 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 CEACAM5P06731 702 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 THEGLP0DJG4 465 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 TFPIP10646 304 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 CAPZA2P47755 286 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 FAM27D1Q5T7N8 215 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 PHC2Q8IXK0 858 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 THEM6Q8WUY1 208 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 ALG8Q9BVK2 526 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 GABARAPL3Q9BY60 117 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 PLCXD1Q9NUJ7 323 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 SLC9B1P1A6NJY1 282 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 UBXN7O94888 489 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 EGFP01133 1207 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 DDOSTP39656 456 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 GRK6P43250 576 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 CTBP2P56545 445 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 RPS15AP62244 130 aaKnown RBP13.86□□□□□ -0.19
CUX1-215ENST00000556210 ADAMTSL4Q6UY14 1074 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 GDPGP1Q6ZNW5 385 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 KIAA1958Q8N8K9 716 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 PROKR2Q8NFJ6 384 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 TMEM239Q8WW34 195 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 SLC35A4Q96G79 324 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 ABCG5Q9H222 651 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 MKKSQ9NPJ1 570 aaPredicted RBP13.86□□□□□ -0.19
CUX1-215ENST00000556210 PAPLNO95428 1278 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 FBXO45P0C2W1 286 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 CRYBA2P53672 197 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 OR5M10Q6IEU7 315 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 BEST4Q8NFU0 473 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 OR52R1Q8NGF1 315 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 OPALINQ96PE5 141 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 TMEM138Q9NPI0 162 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 ZSCAN32Q9NX65 697 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 NPAP1Q9NZP6 1156 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 MKL2Q9ULH7 1088 aa13.86□□□□□ -0.19
CUX1-215ENST00000556210 AK6Q9Y3D8 172 aaKnown RBP13.86□□□□□ -0.19
CUX1-215ENST00000556210 IRGMA1A4Y4 181 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 EML2O95834 649 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 PON3Q15166 354 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 TMEM52BQ4KMG9 183 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 SLC48A1Q6P1K1 146 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 TTLL10Q6ZVT0 673 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 FAM220AQ7Z4H9 259 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 PLPP6Q8IY26 295 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 SAMD14Q8IZD0 417 aaPredicted RBP13.85□□□□□ -0.19
CUX1-215ENST00000556210 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
CUX1-215ENST00000556210 ORAI1Q96D31 301 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 BPIFA2Q96DR5 249 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 MSLNLQ96KJ4 702 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 PPIL3Q9H2H8 161 aaKnown RBP13.85□□□□□ -0.19
CUX1-215ENST00000556210 FN3KQ9H479 309 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 SLC6A20Q9NP91 592 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 MYLKQ15746 1914 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 RHPN2P1A8MT19 583 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 C2orf74A8MZ97 194 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 MAN2B1O00754 1011 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 LYRM1O43325 122 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 ICMTO60725 284 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 DPTQ07507 201 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 AGERQ15109 404 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 SLX4IPQ5VYV7 408 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 ZNF765Q7L2R6 523 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 CCDC190Q86UF4 302 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 ARL14Q8N4G2 192 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 AVL9Q8NBF6 648 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 OR2L8Q8NGY9 312 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 RIT1Q92963 219 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 TBC1D20Q96BZ9 403 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 DPYSL5Q9BPU6 564 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 PINK1Q9BXM7 581 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 Q9N2J8 555 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 FBXO34Q9NWN3 711 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 LYARQ9NX58 379 aaKnown RBP13.85□□□□□ -0.19
CUX1-215ENST00000556210 EIF3KQ9UBQ5 218 aaKnown RBP13.85□□□□□ -0.19
CUX1-215ENST00000556210 ANKRD36A6QL64 1941 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 ANKRD61A6NGH8 418 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 CSN2P05814 226 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 PEPDP12955 493 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 ADPRHP54922 357 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 SKP1P63208 163 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 LGALS3BPQ08380 585 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 TMEM196Q5HYL7 178 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 DCST2Q5T1A1 773 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 MS4A4EQ96PG1 132 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 OR2A14Q96R47 310 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 FAM83CQ9BQN1 747 aa13.85□□□□□ -0.19
CUX1-215ENST00000556210 DIABLOQ9NR28 239 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms