RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 LCN1P31025 176 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 NKAIN1Q4KMZ8 207 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 TMEM201Q5SNT2 666 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 PWWP2BQ6NUJ5 590 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF550Q7Z398 422 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 NAXDQ8IW45 347 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF321PQ8N8H1 164 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 SLC38A9Q8NBW4 561 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 OR8J1Q8NGP2 316 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 RHBDD1Q8TEB9 315 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 TMEM255BQ8WV15 326 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 FAR1Q8WVX9 515 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 GGHQ92820 318 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 ADIPOR1Q96A54 375 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 LCORQ96JN0 433 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-205ENST00000556096 DOK1Q99704 481 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 TRIM2Q9C040 744 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 OR8D2Q9GZM6 311 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 LHPPQ9H008 270 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 CTSFQ9UBX1 484 aa13.57□□□□□ -0.24
VPS33B-205ENST00000556096 OR6C76A6NM76 312 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 FLRT2O43155 660 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 TIAF1O95411 115 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 MT-ND2P03891 347 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ZGLP1P0C6A0 271 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 PAX7P23759 505 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ADH7P40394 386 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ACAA2P42765 397 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SMSP52788 366 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SH3BGRP55822 239 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 DCDP81605 110 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 OCA2Q04671 838 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 GINS1Q14691 196 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 NNATQ16517 81 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SLC25A30Q5SVS4 291 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 AHSA2Q719I0 299 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 MRGPREQ86SM8 312 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 PPP1R3BQ86XI6 285 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 KIF18BQ86Y91 864 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 NRMQ8IXM6 262 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF614Q8N883 585 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 LSMEM1Q8N8F7 131 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 STT3BQ8TCJ2 826 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ISOC1Q96CN7 298 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 CLIP3Q96DZ5 547 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 FAM46AQ96IP4 442 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 HS6ST2Q96MM7 605 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 Q96MT0 163 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 RHNO1Q9BSD3 238 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 COPS4Q9BT78 406 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 NUDT9Q9BW91 350 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 POLDIP3Q9BY77 421 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 MRTO4Q9UKD2 239 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SPEGQ15772 3267 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SERINC4A6NH21 518 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF99A8MXY4 864 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 D6RAR5 112 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 LDOC1O95751 146 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 CDK1P06493 297 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 FGF5P12034 268 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ACVR2AP27037 513 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SLC5A2P31639 672 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 IL11RAQ14626 422 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 OCLNQ16625 522 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 KLHL26Q53HC5 615 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 CCDC157Q569K6 752 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 PHF19Q5T6S3 580 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 OVCH1Q7RTY7 1134 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 FAM26EQ8N5C1 309 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 CLDN22Q8N7P3 220 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 POGLUT1Q8NBL1 392 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 OR1N1Q8NGS0 311 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 OR4C3Q8NH37 302 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 TMEM239Q8WW34 195 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 NXF5Q9H1B4 397 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 UBQLN4Q9NRR5 601 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 CNOT2Q9NZN8 540 aaKnown RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF223Q9UK11 482 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-205ENST00000556096 SLC35A3Q9Y2D2 325 aa13.56□□□□□ -0.24
VPS33B-205ENST00000556096 A0A0B4J2E0 115 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 C2orf92A0A1B0GVN3 265 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 A0A1B0GX12 115 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 EFCAB10A6NFE3 127 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 EFCAB7A8K855 629 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 M0R129 80 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 TO15178 435 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 CHP2O43745 196 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 FOXD2O60548 495 aaPredicted RBP13.55□□□□□ -0.24
VPS33B-205ENST00000556096 NTN1O95631 604 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 GP1BAP07359 652 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 MASP1P48740 699 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
VPS33B-205ENST00000556096 TMBIM6P55061 237 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 EFNB1P98172 346 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 ZFP36L1Q07352 338 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms