RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 SLC6A8P48029 635 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 CCT3P49368 545 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 P2RX1P51575 399 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 CTBP2P56545 445 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 VSNL1P62760 191 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 IFFO1Q0D2I5 559 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 PTGR1Q14914 329 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 CD226Q15762 336 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 BEND4Q6ZU67 534 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 GALNT10Q86SR1 603 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 FNDC5Q8NAU1 212 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 WFDC11Q8NEX6 87 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 FBXO30Q8TB52 745 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 POC1BQ8TC44 478 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 ADAMTS15Q8TE58 950 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 AENQ8WTP8 325 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 OIT3Q8WWZ8 545 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 JADE3Q92613 823 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 CPNE4Q96A23 557 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 C18orf12Q96KH6 178 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 C3orf30Q96M34 536 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 KLHL15Q96M94 604 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 TIGARQ9NQ88 270 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 FBXO34Q9NWN3 711 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 C6orf203Q9P0P8 240 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 ZDHHC2Q9UIJ5 367 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 ICAM5Q9UMF0 924 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 FAF1Q9UNN5 650 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 GPC6Q9Y625 555 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 MPDZO75970 2070 aa11.37□□□□□ -0.59
HNRNPC-221ENST00000555883 AK1P00568 194 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 PSMB1P20618 241 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 LOXP28300 417 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 ARRB2P32121 409 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 ATP12AP54707 1039 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 NR1H2P55055 460 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 NKX6-1P78426 367 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 ZNF117Q03924 483 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 EMX2Q04743 252 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 RNPS1Q15287 305 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 ACKR1Q16570 336 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 SLC25A53Q5H9E4 307 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 BEX5Q5H9J7 111 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 DCST2Q5T1A1 773 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 CCNJQ5T5M9 372 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 IL23RQ5VWK5 629 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 HBMQ6B0K9 141 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 STAC2Q6ZMT1 411 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 ZCCHC23Q6ZST2 131 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 STK32CQ86UX6 486 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 LRRC34Q8IZ02 419 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 KIRREL3Q8IZU9 778 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 LILRA2Q8N149 483 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 GATSQ8NAP1 163 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 TOR1AIP2Q8NFQ8 470 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 RNF128Q8TEB7 428 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 CDS1Q92903 461 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 NPAS1Q99742 590 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 CXorf36Q9H7Y0 433 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 GPR52Q9Y2T5 361 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 SNX8Q9Y5X2 465 aa11.36□□□□□ -0.59
HNRNPC-221ENST00000555883 A0A0J9YW62 118 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 DUXAA6NLW8 204 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 FAM171A2A8MVW0 826 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 TNFSF11O14788 317 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 CXCL13O43927 109 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 GMFGO60234 142 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 EIF4E2O60573 245 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 DNAJA2O60884 412 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 SMPD2O60906 423 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 SPAG7O75391 227 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 SLU7O95391 586 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 NTN1O95631 604 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 TUBBP07437 444 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 GUSBP08236 651 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 HOXB4P17483 251 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 AGTR1P30556 359 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 CLDN8P56748 225 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 CARD18P57730 90 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 TP53BP2Q13625 1128 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 ZNF239Q16600 458 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 AP1ARQ63HQ0 302 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 MREGQ8N565 214 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 PHOSPHO1Q8TCT1 267 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 AGR3Q8TD06 166 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 OSTF1Q92882 214 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 TUBGCP3Q96CW5 907 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 ARSGQ96EG1 525 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 PIK3IP1Q96FE7 263 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 SH3YL1Q96HL8 342 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 MRGPRX4Q96LA9 322 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 TACO1Q9BSH4 297 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 C1orf50Q9BV19 199 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 NMUR2Q9GZQ4 415 aa11.35□□□□□ -0.59
HNRNPC-221ENST00000555883 SSU72Q9NP77 194 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms