RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KLK10O43240 276 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 NDUFB5O43674 189 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ANGPTL1O95841 491 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 F10P00742 488 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 THY1P04216 161 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 CAPNS1P04632 268 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ZNF26P17031 533 aaPredicted RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 NAGAP17050 411 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ACAA2P42765 397 aaKnown RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 SSR4P51571 173 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 TAS2R41P59536 307 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 PSPHP78330 225 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 EFR3AQ14156 821 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 NTRK2Q16620 822 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 EXOC3L2Q2M3D2 409 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ZNF791Q3KP31 576 aaPredicted RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 ACER2Q5QJU3 275 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 OR5M10Q6IEU7 315 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 H3F3CQ6NXT2 135 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 STK32CQ86UX6 486 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ZDHHC13Q8IUH4 622 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 TMEM156Q8N614 296 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ADAMTS16Q8TE57 1224 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ASB15Q8WXK1 588 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 TMCO6Q96DC7 493 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 FER1L6-AS2Q96M78 137 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 FAM210AQ96ND0 272 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 IP6K3Q96PC2 410 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 KLHL4Q9C0H6 718 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 TRBV4-1A0A0J9YWV2 114 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 ADAM10O14672 748 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 EI24O14681 340 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 ADAMDEC1O15204 470 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 HCRTR2O43614 444 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 GADD45GO95257 159 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 UBL4AP11441 157 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 PTNP21246 168 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 LCN1P31025 176 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 DNAJA1P31689 397 aaKnown RBP9.34□□□□□ -0.91
SRP54-208ENST00000555557 ADH7P40394 386 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 TMED10P49755 219 aaKnown RBP9.34□□□□□ -0.91
SRP54-208ENST00000555557 CCR4P51679 360 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
SRP54-208ENST00000555557 FOXK2Q01167 660 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 AIMP2Q13155 320 aaKnown RBP9.34□□□□□ -0.91
SRP54-208ENST00000555557 OR1Q1Q15612 314 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 PRAMEF20Q5VT98 475 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 PLEKHM3Q6ZWE6 761 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 NUP54Q7Z3B4 507 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 CYP4Z1Q86W10 505 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 GRAMD2AQ8IUY3 354 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 CMIPQ8IY22 773 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 ARMC10Q8N2F6 343 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 SLC15A4Q8N697 577 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 OR4C15Q8NGM1 316 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 OR5K1Q8NHB7 308 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 DUSP19Q8WTR2 217 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 ZNF524Q96C55 264 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 PRRC1Q96M27 445 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 FNDC11Q9BVV2 318 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 SMURF2Q9HAU4 748 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 STMN3Q9NZ72 180 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 PDP1Q9P0J1 537 aaPredicted RBP9.34□□□□□ -0.91
SRP54-208ENST00000555557 ACAD8Q9UKU7 415 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 SLC35A3Q9Y2D2 325 aa9.34□□□□□ -0.91
SRP54-208ENST00000555557 FRYQ5TBA9 3013 aa9.34□□□□□ -0.92
SRP54-208ENST00000555557 TPRP12270 2363 aaKnown RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 B4DXG7 233 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 H3BNH8 94 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ZNF264O43296 627 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 NGFRP08138 427 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 FPR1P21462 350 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 AQP4P55087 323 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ZNF117Q03924 483 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SKP2Q13309 424 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SEC23BQ15437 767 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 INPP5JQ15735 1006 aaPredicted RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 FGD3Q5JSP0 725 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 COLEC12Q5KU26 742 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SHQ1Q6PI26 577 aaKnown RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 OPN5Q6U736 354 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 IZUMO2Q6UXV1 221 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 MDGA2Q7Z553 956 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 RANBP3LQ86VV4 465 aaPredicted RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 BEST3Q8N1M1 668 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 CADM2Q8N3J6 435 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 TMCO5AQ8N6Q1 288 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 MAGEE2Q8TD90 523 aaPredicted RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 THAP4Q8WY91 577 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 TTC9Q92623 222 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ALPK1Q96QP1 1244 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 C9orf16Q9BUW7 83 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 LHPPQ9H008 270 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ING2Q9H160 280 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 MAN2C1Q9NTJ4 1040 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 HPF1Q9NWY4 346 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms