RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PAK1IP1Q9NWT1 392 aaPredicted RBP1.83□□□□□ -2.12
SNX6-204ENST00000555541 GDAP2Q9NXN4 497 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 TP53TG5Q9Y2B4 290 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 NEUROG3Q9Y4Z2 214 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 DHX29Q7Z478 1369 aaKnown RBP1.83□□□□□ -2.12
SNX6-204ENST00000555541 A0A096LNJ9 63 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 IGHV3-64DA0A0J9YX35 117 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 E9PMD0 336 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 SGK494L7N484 410 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 CASKO14936 926 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 HSF2BPO75031 334 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 MED6O75586 246 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 H2AFXP16104 143 aaPredicted RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 MUTP22033 750 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 PTPN6P29350 595 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 PRDX3P30048 256 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 CTNNA1P35221 906 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 LONP1P36776 959 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 NOVA1P51513 510 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 SRP54P61011 504 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 MAP2K1Q02750 393 aaPredicted RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 C17orf67Q0P5P2 114 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 MADCAM1Q13477 382 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 TFDP1Q14186 410 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 LY6EQ16553 131 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 IL23RQ5VWK5 629 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 OR8G2PQ6IF36 304 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 IGFL1Q6UW32 110 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 FAM159AQ6UWV7 190 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 C1orf186Q6ZWK4 172 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 VPS36Q86VN1 386 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 CCDC170Q8IYT3 715 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 C10orf53Q8N6V4 93 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 OR51G1Q8NGK1 321 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 MCHR1Q99705 422 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 WRAP53Q9BUR4 548 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 SRXN1Q9BYN0 137 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 PLA2G2FQ9BZM2 168 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 COMMD4Q9H0A8 199 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 DDX47Q9H0S4 455 aaKnown RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 MAGT1Q9H0U3 335 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 GPN2Q9H9Y4 310 aaPredicted RBP1.82□□□□□ -2.12
SNX6-204ENST00000555541 TRIM10Q9UDY6 481 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 TBX21Q9UL17 535 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 TEX264Q9Y6I9 313 aa1.82□□□□□ -2.12
SNX6-204ENST00000555541 TRBV2A0A0J9YWF9 115 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 PES1O00541 588 aaKnown RBP1.81□□□□□ -2.12
SNX6-204ENST00000555541 GOSR1O95249 250 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 SNAPINO95295 136 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 IGKV1-17P01599 117 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 SLC4A1P02730 911 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 ABHD2P08910 425 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 ZCCHC18P0CG32 403 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 ADRB3P13945 408 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 XRCC1P18887 633 aaPredicted RBP1.81□□□□□ -2.12
SNX6-204ENST00000555541 CCR6P51684 374 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 ST3GAL3Q11203 375 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 GGTLC2Q14390 218 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 CYS1Q717R9 158 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 ZSCAN4Q8NAM6 433 aaPredicted RBP1.81□□□□□ -2.12
SNX6-204ENST00000555541 ELMO2Q96JJ3 720 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 NFKBIZQ9BYH8 718 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 TRPV5Q9NQA5 729 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 C6orf203Q9P0P8 240 aaPredicted RBP1.81□□□□□ -2.12
SNX6-204ENST00000555541 HMG20BQ9P0W2 317 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 BTNL2Q9UIR0 455 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 PLA2G4CQ9UP65 541 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 ERVW-1Q9UQF0 538 aa1.81□□□□□ -2.12
SNX6-204ENST00000555541 LRP4O75096 1905 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 PCM1Q15154 2024 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 ZNF780AO75290 641 aaPredicted RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 TSPAN8P19075 237 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 CSNK1G2P78368 415 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 GFPT1Q06210 699 aaPredicted RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 CASC10Q5T4H9 136 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 FAM71E1Q6IPT2 247 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 NEK5Q6P3R8 708 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 TMEM184AQ6ZMB5 413 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 ACP7Q6ZNF0 438 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 ABHD12BQ7Z5M8 362 aaPredicted RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 KRT77Q7Z794 578 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 VRK2Q86Y07 508 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 CERS5Q8N5B7 392 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 PHF10Q8WUB8 498 aaKnown RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 PIGCQ92535 297 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 UCN3Q969E3 161 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 RPUSD4Q96CM3 377 aaKnown RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 OR2M2Q96R28 347 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 FEM1AQ9BSK4 669 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 POLR2J2Q9GZM3 115 aaKnown RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 POLR2J3Q9H1A7 115 aaKnown RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 SLC25A51Q9H1U9 297 aa1.8□□□□□ -2.12
SNX6-204ENST00000555541 RBAKQ9NYW8 714 aaPredicted RBP1.8□□□□□ -2.12
SNX6-204ENST00000555541 A0A1W2PRQ8 180 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 TMEM150BA6NC51 233 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 ADAM12O43184 909 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 FAM189A1O60320 539 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 CXCL10P02778 98 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms