RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ST3GAL3Q11203 375 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 RAB40BQ12829 278 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 TP53I3Q53FA7 332 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 TEX44Q53QW1 395 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 NHLRC3Q5JS37 347 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 WSCD1Q658N2 575 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 OR4F3Q6IEY1 312 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 CTAGE6Q86UF2 777 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 SLC22A18ASQ8N1D0 253 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 Q8N377 158 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 C15orf54Q8N8G6 183 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 WDSUB1Q8N9V3 476 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 OR51G2Q8NGK0 314 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 OR9A4Q8NGU2 314 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 TMEM80Q96HE8 168 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 RPRD1AQ96P16 312 aaPredicted RBP4.32□□□□□ -1.72
PSEN1-211ENST00000554995 CCDC77Q9BR77 488 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 SLC39A3Q9BRY0 314 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 TUBGCP2Q9BSJ2 902 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 ANP32EQ9BTT0 268 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 TM2D1Q9BX74 207 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 HCAR1Q9BXC0 346 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 ADNPQ9H2P0 1102 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 SGK2Q9HBY8 427 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 ONECUT1Q9UBC0 465 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 ADAM28Q9UKQ2 775 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 RASD1Q9Y272 281 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 PIGLQ9Y2B2 252 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 POLDIP2Q9Y2S7 368 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 TIMM10BQ9Y5J6 103 aa4.32□□□□□ -1.72
PSEN1-211ENST00000554995 USP6P35125 1406 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 A0A0U1RQS6 177 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 FAM240BA0A1B0GVZ2 78 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 SNTNA6NMZ2 147 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 FOXE1O00358 373 aaPredicted RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 NBR2O15453 112 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 HPP00738 406 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 UQCRFS1P1P0C7P4 283 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 POU2F1P14859 743 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 ALDH3B2P48448 385 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 LIM2P55344 173 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 SEC61GP60059 68 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 OC90Q02509 493 aaPredicted RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 CRMP1Q14194 572 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 SLC10A1Q14973 349 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 NDUFA9Q16795 377 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 PPP1R3AQ16821 1122 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 MICAQ29983 383 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 SLC25A52Q3SY17 297 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 PDZK1Q5T2W1 519 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 TIPARPQ7Z3E1 657 aaKnown RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 DHRSXQ8N5I4 330 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 Q8N9G6 341 aaPredicted RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 ADAMTS16Q8TE57 1224 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 TRUB1Q8WWH5 349 aaKnown RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 IL1F10Q8WWZ1 152 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 RBM14Q96PK6 669 aaKnown RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 OR5B2Q96R09 309 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 TRIM51Q9BSJ1 452 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 ZBP1Q9H171 429 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 TIGARQ9NQ88 270 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 ETNK2Q9NVF9 386 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 RABL2AQ9UBK7 228 aaPredicted RBP4.31□□□□□ -1.72
PSEN1-211ENST00000554995 SEC14L3Q9UDX4 400 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 SLC2A6Q9UGQ3 507 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 USP16Q9Y5T5 823 aa4.31□□□□□ -1.72
PSEN1-211ENST00000554995 NSD2O96028 1365 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-211ENST00000554995 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ZNF840PA6NDX5 716 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ZNF716A6NP11 495 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 G3V3Y1 287 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 FCN1O00602 326 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 MED7O43513 233 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 TIMM8AO60220 97 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ERLIN1O75477 346 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 RENP00797 406 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ZNF735P0CB33 412 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 HSMCR30P0CW71 290 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 CT45A10P0DMU9 189 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 PTBP1P26599 531 aaKnown RBP eCLIP4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ATP5IP56385 69 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-211ENST00000554995 BST1Q10588 318 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 LTB4RQ15722 352 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 SFT2D3Q587I9 215 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ADAM5Q6NVV9 412 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 TRPM8Q7Z2W7 1104 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 NANOGNBQ7Z5D8 188 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 UBE2J2Q8N2K1 259 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 MFSD9Q8NBP5 474 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 CSNK1G2-AS1Q8NCQ2 148 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 OR6T1Q8NGN1 323 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 SCFD1Q8WVM8 642 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ITLN1Q8WWA0 313 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 TCEANC2Q96MN5 208 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ROPN1BQ9BZX4 212 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-211ENST00000554995 GLIPR2Q9H4G4 154 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
PSEN1-211ENST00000554995 ARMCX1Q9P291 453 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms