RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 ZNF836Q6ZNA1 936 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 DNAJC22Q8N4W6 341 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 LSM14AQ8ND56 463 aaKnown RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 GGHQ92820 318 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 KCNS3Q9BQ31 491 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 PINK1Q9BXM7 581 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 NUAK2Q9H093 628 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 MMP28Q9H239 520 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 CHRDQ9H2X0 955 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 EGLN3Q9H6Z9 239 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 KCNE5Q9UJ90 142 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 C19orf53Q9UNZ5 99 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 E9PQ18 207 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 LMO7DNF2Z398 122 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 FAAHO00519 579 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 CCNYL3P0C7X3 344 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ALDH6A1Q02252 535 aaKnown RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ST3GAL4Q11206 333 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 STX4Q12846 297 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 EFR3AQ14156 821 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 CLEC12AQ5QGZ9 265 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 DEFB123Q8N688 67 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 CADM4Q8NFZ8 388 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 FAM46AQ96IP4 442 aaKnown RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 SPACA7Q96KW9 195 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 CNPPD1Q9BV87 410 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ITPAQ9BY32 194 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 NDOR1Q9UHB4 597 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF443Q9Y2A4 671 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 SIT1Q9Y3P8 196 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 HSPE1-MOB4S4R3N1 261 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 A0A087WUU8 490 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 HMX3A6NHT5 357 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 BCAT2O15382 392 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PIP5K1CO60331 668 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ICAM2P13598 275 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 OR1D4P47884 311 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 LIMK1P53667 647 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 TOR2AQ5JU69 321 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ENTPD8Q5MY95 495 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 DCST2Q5T1A1 773 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PRSS58Q8IYP2 241 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ARHGEF39Q8N4T4 335 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 AHCYL2Q96HN2 611 aaKnown RBP10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PLA2G12AQ9BZM1 189 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 TVP23BQ9NYZ1 205 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 LIPT1Q9Y234 373 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 HYKKA2RU49 373 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 SMIM30A4D0T7 59 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ZAR1LA6NP61 321 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 FAM25AB3EWG3 89 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 FAM25CB3EWG5 89 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 FAM25GB3EWG6 89 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 H3BUI4 141 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 K7ESF4 209 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PIAS2O75928 621 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 APOL3O95236 402 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 THY1P04216 161 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ATP1B1P05026 303 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 YES1P07947 543 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 GABRB1P18505 474 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 S100A5P33763 92 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 RAB38P57729 211 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 CDC42P60953 191 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 DAB2P98082 770 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF267Q14586 743 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-212ENST00000554467 HEPHL1Q6MZM0 1159 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PLEKHM3Q6ZWE6 761 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 SLC25A45Q8N413 288 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 B3GNT7Q8NFL0 401 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PRRC1Q96M27 445 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 NELL2Q99435 816 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 FUZQ9BT04 418 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PTGFRNQ9P2B2 879 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 DHCR7Q9UBM7 475 aaKnown RBP10.84□□□□□ -0.67
SHMT2-212ENST00000554467 CELSR3Q9NYQ7 3312 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 A8MUA0 341 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 TFECO14948 347 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ENTPD6O75354 484 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 CBX7O95931 251 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ADAP00813 363 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 IL7P13232 177 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 OSMP13725 252 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 FUT1P19526 365 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 GPR4P46093 362 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 CD83Q01151 205 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PRTGQ2VWP7 1150 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ARMCX4Q5H9R4 360 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF730Q6ZMV8 503 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 CCDC190Q86UF4 302 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 VWA5B2Q8N398 1253 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 TCEANCQ8N8B7 351 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 MORN4Q8NDC4 146 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms