RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 PGAM4Q8N0Y7 254 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 ELMOD1Q8N336 334 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 CCNYL1Q8N7R7 359 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 PPFIBP2Q8ND30 876 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 OR52J3Q8NH60 311 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 SPPL2BQ8TCT7 592 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 SELENOMQ8WWX9 145 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 PYDC1Q8WXC3 89 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 SMARCD2Q92925 531 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 CLDN23Q96B33 292 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 L3HYPDHQ96EM0 354 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 URB1-AS1Q96HZ7 61 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 PPP1R36Q96LQ0 422 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 TSNARE1Q96NA8 513 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF184Q99676 751 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 TRMT61BQ9BVS5 477 aaKnown RBP4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 C1QTNF5Q9BXJ0 243 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 MEAF6Q9HAF1 191 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 LMAN1LQ9HAT1 526 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 ZFP14Q9HCL3 533 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF334Q9HCZ1 680 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 FAM120CQ9NX05 1096 aaKnown RBP4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 NDE1Q9NXR1 346 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 DONSONQ9NYP3 566 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 RNF7Q9UBF6 113 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 UXTQ9UBK9 157 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 IL17BQ9UHF5 180 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 NDRG2Q9UN36 371 aaKnown RBP4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 RAI2Q9Y5P3 530 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 CEPT1Q9Y6K0 416 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 CEP295Q9C0D2 2601 aa4.8□□□□□ -1.64
MTHFD1-206ENST00000554353 SCN8AQ9UQD0 1980 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 A0A0A6YYC8 382 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 A0A0D9SEW6 157 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 PRSS51A0A1B0GVH4 220 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 A0A1B0GVT2 93 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 MAGEA13PA6NCF6 341 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 TRPC5OSA6NMA1 111 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 B4DGG1 531 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 I3L1I5 382 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 FBP2O00757 339 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ACOT8O14734 319 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 HS3ST1O14792 307 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 TNFRSF13BO14836 293 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 AIM2O14862 343 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ACSL4O60488 711 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 B4GALT2O60909 372 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NIPSNAP2O75323 286 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NEBLO76041 1014 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 MFN2O95140 757 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NDUFB4O95168 129 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 GOT2P00505 430 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 FGF1P05230 155 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 HMBSP08397 361 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CALCBP10092 127 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 HOXB2P14652 356 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CD1DP15813 335 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF182P17025 639 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NAGAP17050 411 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ATF6P18850 670 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 OGNP20774 298 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 IMPDH1P20839 514 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 PKLRP30613 574 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 SLC26A3P40879 764 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NR4A2P43354 598 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 RGRP47804 291 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 PSMD8P48556 350 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NUDT2P50583 147 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 KPNA2P52292 529 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF140P52738 457 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 RBPJQ06330 500 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 TEAD2Q15562 447 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 FAM83EQ2M2I3 478 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CDONQ4KMG0 1287 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 TCHHL1Q5QJ38 904 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 C10orf120Q5SQS8 335 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF678Q5SXM1 525 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 LRIF1Q5T3J3 769 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ARMC12Q5T9G4 340 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 OGFRL1Q5TC84 451 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 PRAMEF8Q5VWM4 474 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 LPCAT4Q643R3 524 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 C8orf82Q6P1X6 216 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 VITQ6UXI7 678 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 IZUMO2Q6UXV1 221 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 SETD3Q86TU7 594 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 LGI2Q8N0V4 545 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 SCCPDHQ8NBX0 429 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 OR13C4Q8NGS5 318 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 C9orf43Q8TAL5 461 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 FAM3CQ92520 227 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 WBP2Q969T9 261 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 TMIGD2Q96BF3 282 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CCDC124Q96CT7 223 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 RCN3Q96D15 328 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 RASD2Q96D21 266 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CCDC126Q96EE4 140 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 BSCL2Q96G97 398 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms