RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SOX14O95416 240 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ACSM4P0C7M7 580 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 C4BPBP20851 252 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 DNASE1P24855 282 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SSTR2P30874 369 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 PBX2P40425 430 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 RGS19P49795 217 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SNRPNP63162 240 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 CSTF1Q05048 431 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ZIC1Q15915 447 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 TFAP2EQ6VUC0 442 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 DEF8Q6ZN54 512 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ASB18Q6ZVZ8 466 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 LSRQ86X29 649 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 TEX47Q8TBZ9 253 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ERMAPQ96PL5 475 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 YIPF4Q9BSR8 244 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 FUZQ9BT04 418 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 POLR2J3Q9H1A7 115 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 OR51I1Q9H343 314 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 DPAGT1Q9H3H5 408 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 LDAHQ9H6V9 325 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 MVB12BQ9H7P6 319 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ZSCAN32Q9NX65 697 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SCP2D1Q9UJQ7 156 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 COPS3Q9UNS2 423 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 NUBP2Q9Y5Y2 271 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 KRBOX1C9JBD0 128 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 M0R233 179 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 M0R3H8 397 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 CASC3O15234 703 aaKnown RBP11.42□□□□□ -0.58
SHMT2-207ENST00000553837 LINC01565O15544 149 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 SLC28A2O43868 658 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 PRICKLE3O43900 615 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-207ENST00000553837 CLEC3AO75596 197 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 LDOC1O95751 146 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-207ENST00000553837 TP53P04637 393 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-207ENST00000553837 CXCL3P19876 107 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 SSR2P43308 183 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 RAB28P51157 221 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 FUT5Q11128 374 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 ZMYND11Q15326 602 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 TCEA2Q15560 299 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 METTL11BQ5VVY1 283 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 HACD4Q5VWC8 232 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 SZRD1Q7Z422 152 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 OR52E1Q8NGJ3 308 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 XAGE5Q8WWM1 108 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 YIPF5Q969M3 257 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 UBL7Q96S82 380 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-207ENST00000553837 MYADMQ96S97 322 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 POLDIP3Q9BY77 421 aaKnown RBP11.42□□□□□ -0.58
SHMT2-207ENST00000553837 RBCK1Q9BYM8 510 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 TVP23BQ9NYZ1 205 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 EXTL2Q9UBQ6 330 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 ADAM29Q9UKF5 820 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 ATG4BQ9Y4P1 393 aa11.42□□□□□ -0.58
SHMT2-207ENST00000553837 MEIKINA0A087WXM9 373 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 TEX13CA0A0J9YWL9 993 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 A0A1W2PR48 441 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 EPOPA6NHQ4 379 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 OR6C65A6NJZ3 312 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 LINC01387J3KSC0 135 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MAN2B1O00754 1011 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 NARSO43776 548 aaKnown RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PRKYO43930 277 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SSX5O60225 188 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 OR10H3O60404 316 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 NME6O75414 186 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 LALBAP00709 142 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 CFDP00746 253 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 HLA-DPB1P04440 258 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PEPDP12955 493 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ELK1P19419 428 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 AHCYP23526 432 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MAT2AP31153 395 aaKnown RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 IGFALSP35858 605 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PIN1Q13526 163 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 NTRK2Q16620 822 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 DCST1Q5T197 706 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 OR2G6Q5TZ20 316 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PARM1Q6UWI2 310 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 OR5T2Q8NGG2 359 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SUN3Q8TAQ9 357 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SLC7A13Q8TCU3 470 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 FGF14Q92915 247 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MS4A6EQ96DS6 147 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 C1QTNF2Q9BXJ5 285 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 FGF20Q9NP95 211 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PRDM7Q9NQW5 492 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ACSS1Q9NUB1 689 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 NUDT15Q9NV35 164 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SDHAF2Q9NX18 166 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms