RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GJE1A6NN92 205 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 B4DXG7 233 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 H3BNH8 94 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 SLC28A1O00337 649 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 HS3ST1O14792 307 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 SS18L1O75177 396 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 OXSR1O95747 527 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 CGAP01215 116 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 GHRHP01286 108 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 FESP07332 822 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 CD3EP07766 207 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 UROSP10746 265 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 NEFHP12036 1026 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 SLC6A8P48029 635 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 FOXA1P55317 472 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 RPL38P63173 70 aaKnown RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 SLC18A2Q05940 514 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 DMTNQ08495 405 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 CTU2Q2VPK5 515 aaKnown RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 SPDYE7PQ495Y7 208 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 ZYG11AQ6WRX3 759 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 TIFABQ6ZNK6 161 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 FRMD7Q6ZUT3 714 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 GGNQ86UU5 652 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 EXOC3L1Q86VI1 746 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 MISPQ8IVT2 679 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 IFT20Q8IY31 132 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 ZNF619Q8N2I2 560 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 GTPBP8Q8N3Z3 284 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 ZNF614Q8N883 585 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 ZNF527Q8NB42 609 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 ATP6V1C2Q8NEY4 427 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 OR6Y1Q8NGX8 325 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 CLHC1Q8NHS4 586 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 AKAP1Q92667 903 aaKnown RBP eCLIP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 CIDECQ96AQ7 238 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 TRMT61AQ96FX7 289 aaKnown RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 RTN4RQ9BZR6 473 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 RASSF4Q9H2L5 321 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 ESRP2Q9H6T0 727 aaKnown RBP8.87□□□□□ -0.99
ACTN1-208ENST00000553370 LRTM1Q9HBL6 345 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 C1orf109Q9NX04 203 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 SIRT5Q9NXA8 310 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 LAMP3Q9UQV4 416 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
ACTN1-208ENST00000553370 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.991e-6■■■□□ 16.5
ACTN1-208ENST00000553370 A0A1W2PP18 115 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 A0A1W2PRB8 838 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 KIAA1324LA8MWY0 1029 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 ALG1L2C9J202 215 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 J3QW42 95 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 GTPBP1O00178 669 aaKnown RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 RIPK2O43353 540 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 TMCC2O75069 709 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 PSMG1O95456 288 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 NID1P14543 1247 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 AGTR1P30556 359 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 SLC7A1P30825 629 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 EIF1P41567 113 aaKnown RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 PRIM2P49643 509 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 CCR4P51679 360 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 CARD18P57730 90 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 RAC1P63000 192 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 POU6F2P78424 691 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 RNPS1Q15287 305 aaKnown RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 PLPPR5Q32ZL2 321 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 CCDC153Q494R4 210 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 GALNTL6Q49A17 601 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 CPTPQ5TA50 214 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 CLEC6AQ6EIG7 209 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 STAC2Q6ZMT1 411 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 DDIASQ8IXT1 998 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 LILRA2Q8N149 483 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 TMEM151AQ8N4L1 468 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 BANPQ8N9N5 519 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 B4GALNT2Q8NHY0 566 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 PPP1R14CQ8TAE6 165 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 PHOSPHO1Q8TCT1 267 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 KISS1RQ969F8 398 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 FBXW5Q969U6 566 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 ARL8AQ96BM9 186 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 S100PBPQ96BU1 408 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 ANAPC16Q96DE5 110 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 OTUB1Q96FW1 271 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 KLHL15Q96M94 604 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 HS6ST2Q96MM7 605 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 TSSK3Q96PN8 268 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 CCT7Q99832 543 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 PLSCR4Q9NRQ2 329 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 UBQLN4Q9NRR5 601 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 ZCCHC3Q9NUD5 404 aaKnown RBP8.86□□□□□ -0.99
ACTN1-208ENST00000553370 MED17Q9NVC6 651 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 TAS2R7Q9NYW3 318 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 MID2Q9UJV3 735 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 GPR52Q9Y2T5 361 aa8.86□□□□□ -0.99
ACTN1-208ENST00000553370 IGLV3-32A0A0A0MS00 114 aa8.85□□□□□ -0.99
ACTN1-208ENST00000553370 UBFD1O14562 309 aaKnown RBP8.85□□□□□ -0.99
ACTN1-208ENST00000553370 COPEO14579 308 aa8.85□□□□□ -0.99
ACTN1-208ENST00000553370 AZIN1O14977 448 aa8.85□□□□□ -0.99
ACTN1-208ENST00000553370 NKX2-2O95096 273 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms