RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 VHLP40337 213 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 MSH2P43246 934 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 LHX1P48742 406 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 HCAR3P49019 387 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TAS2R40P59535 323 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GPX6P59796 221 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RAB4BP61018 213 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RPL26P61254 145 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 VSNL1P62760 191 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TFAMQ00059 246 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GCNT1Q02742 428 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TLE4Q04727 773 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 C2orf54Q08AI8 447 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RIPPLY1Q0D2K3 151 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CALCOCO2Q13137 446 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 MED22Q15528 200 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 HNRNPA1L2Q32P51 320 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM30BQ3MIR4 351 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 VWA2Q5GFL6 755 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 BRMS1LQ5PSV4 323 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 C10orf120Q5SQS8 335 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 C9orf64Q5T6V5 341 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 HES5Q5TA89 166 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 FAM205BPQ63HN1 556 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RWDD4Q6NW29 188 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 PRMT9Q6P2P2 845 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 PLXDC2Q6UX71 529 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RBM43Q6ZSC3 357 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 FRA10AC1Q70Z53 315 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GALNTL5Q7Z4T8 443 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TRIM69Q86WT6 500 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 LRRC6Q86X45 466 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ARHGAP12Q8IWW6 846 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GBGT1Q8N5D6 347 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 SLC5A8Q8N695 610 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 WDSUB1Q8N9V3 476 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CCDC197Q8NCU1 140 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM161BQ8NDZ6 487 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 WFDC5Q8TCV5 224 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CHPT1Q8WUD6 406 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 KCTD4Q8WVF5 259 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 NRGNQ92686 78 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 MYDGFQ969H8 173 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 TMIGD2Q96BF3 282 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 BIRC8Q96P09 236 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 BARD1Q99728 777 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 C19orf43Q9BQ61 176 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 NUP85Q9BW27 656 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 POLR1EQ9GZS1 481 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GORASP2Q9H8Y8 452 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RDH14Q9HBH5 336 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 LZTFL1Q9NQ48 299 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 RPRD1BQ9NQG5 326 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 FAM114A2Q9NRY5 505 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 C20orf96Q9NUD7 363 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 DDX28Q9NUL7 540 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CYB5R1Q9UHQ9 305 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 PSME2Q9UL46 239 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CDH9Q9ULB4 789 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 DIMT1Q9UNQ2 313 aaKnown RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 NME7Q9Y5B8 376 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 UNC13CQ8NB66 2214 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 ILVBLA1L0T0 632 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 RNF212BA8MTL3 300 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM178BH3BS89 294 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 hCG_2039718K7EN88 272 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TOR1AO14656 332 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CLOCKO15516 846 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 HCRTR2O43614 444 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 BUD23O43709 281 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 PFKFB2O60825 505 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CDH16O75309 829 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SNAP29O95721 258 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 HSPA4LO95757 839 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 APOC1P02654 83 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 OPN1LWP04000 364 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TFAP2AP05549 437 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 LYNP07948 512 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 INHBAP08476 426 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 PLA2G4BP0C869 781 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TPBGLP0DKB5 382 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CXCR2P25025 360 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 AKT2P31751 481 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CASP14P31944 242 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TALDO1P37837 337 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 GP5P40197 560 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 NPY2RP49146 381 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 HNMTP50135 292 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SGSHP51688 502 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 NR0B1P51843 470 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CD81P60033 236 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 ST8SIA6P61647 398 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 GNG11P61952 73 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 MPP1Q00013 466 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms