RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ACVR1BP36896 505 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 CCT3P49368 545 aaKnown RBP3.99□□□□□ -1.77
SCFD1-209ENST00000553280 BEX3Q00994 111 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 C1orf61Q13536 156 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 IDI1Q13907 227 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 PPP1R3AQ16821 1122 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 TIGITQ495A1 244 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 GLIPR1L2Q4G1C9 344 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 SFT2D3Q587I9 215 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 PHYHD1Q5SRE7 291 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 GFI1BQ5VTD9 330 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 WSCD1Q658N2 575 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 TPGS2Q68CL5 300 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 LEMD1Q68G75 181 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 OR4F3Q6IEY1 312 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 ZNF343Q6P1L6 599 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 CCBE1Q6UXH8 406 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-209ENST00000553280 SERPINA9Q86WD7 417 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 SLC22A9Q8IVM8 553 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 SLC22A18ASQ8N1D0 253 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 Q8N377 158 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 ADAMTS16Q8TE57 1224 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 NR4A3Q92570 626 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 TMEM80Q96HE8 168 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 OR5B2Q96R09 309 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 CITED1Q99966 193 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 PARD6BQ9BYG5 372 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 PKIBQ9C010 78 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 NXF5Q9H1B4 397 aaKnown RBP3.99□□□□□ -1.77
SCFD1-209ENST00000553280 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 GLIPR2Q9H4G4 154 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 SLC17A5Q9NRA2 495 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 IL36GQ9NZH8 169 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 POLDIP2Q9Y2S7 368 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 L3MBTL1Q9Y468 752 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 IGHV2-70DA0A0C4DH43 119 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 LRP5LA4QPB2 252 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 SAGE2PA6NJ88 616 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 FAM220BPB1ANY3 271 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 G3V3Y1 287 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 G3V4G9 280 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 H3BMQ9 156 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 SLC17A2O00624 439 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 LRRTM2O43300 516 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 HSMCR30P0CW71 290 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 POU2F1P14859 743 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 VLDLRP98155 873 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 ST3GAL3Q11203 375 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 KCNJ11Q14654 390 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 CFAP221Q4G0U5 840 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 RUFY3Q7L099 469 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 TRPM8Q7Z2W7 1104 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 TIPARPQ7Z3E1 657 aaKnown RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 NANOGNBQ7Z5D8 188 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 NBPF5PQ86XG9 351 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 CLEC4FQ8N1N0 589 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 DHRSXQ8N5I4 330 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 Q8N9G6 341 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 ITLN1Q8WWA0 313 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 RPRD1AQ96P16 312 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 RBM14Q96PK6 669 aaKnown RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 CCNL2Q96S94 520 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 PSMB7Q99436 277 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 TM2D1Q9BX74 207 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 GNB4Q9HAV0 340 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 SGK2Q9HBY8 427 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 MCCC2Q9HCC0 563 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 TIGARQ9NQ88 270 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 ADAM28Q9UKQ2 775 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 SAMD4AQ9UPU9 718 aaKnown RBP3.98□□□□□ -1.77
SCFD1-209ENST00000553280 SCML2Q9UQR0 700 aa3.98□□□□□ -1.77
SCFD1-209ENST00000553280 SNTNA6NMZ2 147 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 SHISA9B4DS77 424 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 E9PQ18 207 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 NBR2O15453 112 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 RS1O15537 224 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 ZNF264O43296 627 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 SERPINA3P01011 423 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 ACADSP16219 412 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 NCF2P19878 526 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-209ENST00000553280 MX1P20591 662 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CYP2B6P20813 491 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 IMPDH1P20839 514 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 SERPINA2P20848 420 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 IDSP22304 550 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CD80P33681 288 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 HMGCLP35914 325 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 MAGEA8P43361 318 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CRMP1Q14194 572 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 DPYSL2Q16555 572 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 TP53I3Q53FA7 332 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 BEND3Q5T5X7 828 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 METTL7BQ6UX53 244 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CCDC50Q8IVM0 306 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 KIR3DL3Q8N743 410 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CSNK1A1LQ8N752 337 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms