RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CNIH4Q9P003 139 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 MKLN1Q9UL63 735 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ABCG2Q9UNQ0 655 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 RNF6Q9Y252 685 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 KCNE3Q9Y6H6 103 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 DNAJC13O75165 2243 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF407Q9C0G0 2248 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 NPIPA5A0A0B4J1W7 369 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 NPIPA7E9PJI5 369 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 G3V3Y1 287 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 KLRC4-KLRK1H3BQV0 150 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ACOT7O00154 380 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 GTPBP1O00178 669 aaKnown RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 NME2P1O60361 137 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 UGT2B11O75310 529 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 TPOP07202 933 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 HOXD4P09016 255 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 NUDT7P0C024 238 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 NPIPA8P0DM63 369 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ARAFP10398 606 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 HOXB9P17482 250 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 GPX2P18283 190 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 NME2P22392 152 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 AQP1P29972 269 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 CHRNB4P30926 498 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 EVI2BP34910 448 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 MAN2A2P49641 1150 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 CCR4P51679 360 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 LIPEQ05469 1076 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 SYPL1Q16563 259 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 RPS26P11Q5JNZ5 115 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 TMEM211Q6ICI0 200 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 REEP3Q6NUK4 255 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 LRRC74BQ6ZQY2 392 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF227Q86WZ6 799 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ARMC10Q8N2F6 343 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 FBXW8Q8N3Y1 598 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 RPRMLQ8N4K4 120 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 METTL25Q8N6Q8 603 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ANKFN1Q8N957 763 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 RBM15BQ8NDT2 890 aaKnown RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 CHDHQ8NE62 594 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 OR4K17Q8NGC6 315 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 WDR60Q8WVS4 1066 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 REXO5Q96IC2 774 aaKnown RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF597Q96LX8 424 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 SECISBP2Q96T21 854 aaKnown RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 SDF2Q99470 211 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 IKZF5Q9H5V7 419 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 KAT8Q9H7Z6 458 aaKnown RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 UBQLN4Q9NRR5 601 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 PPP4R1LQ9P1A2 415 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 B4GALT7Q9UBV7 327 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 KCNN3Q9UGI6 736 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 BOKQ9UMX3 212 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-218ENST00000552839 ABCA4P78363 2273 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
TMEM116-218ENST00000552839 A0A0G2JPF8 293 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ELOVL7A1L3X0 281 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 HNRNPCL2B2RXH8 293 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 HNRNPCL3B7ZW38 293 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 NDUFB5O43674 189 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 KIAA0513O60268 411 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 TSPAN2O60636 221 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 SERPINB7O75635 380 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 CYP7B1O75881 506 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 IFNA14P01570 189 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 HNRNPCL4P0DMR1 293 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 CCL3P10147 92 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 IL7RP16871 459 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 TCN1P20061 433 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ENDOUP21128 410 aaKnown RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 PCGF2P35227 344 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 EEFSECP57772 596 aaKnown RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 GPR85P60893 370 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 FOXD4Q12950 439 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 LARS2Q15031 903 aaKnown RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 TOMM20Q15388 145 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF791Q3KP31 576 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 GRAMD1BQ3KR37 738 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 LIN52Q52LA3 116 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 PRAMEF8Q5VWM4 474 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 PRAMEF7Q5VXH5 474 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 HEPHL1Q6MZM0 1159 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 SLC30A6Q6NXT4 461 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 RINLQ6ZS11 566 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 PATL1Q86TB9 770 aaKnown RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 CCDC71Q8IV32 467 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 MICU2Q8IYU8 434 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 RNF148Q8N7C7 305 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 GATSQ8NAP1 163 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 PHOSPHO1Q8TCT1 267 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 SLC38A5Q8WUX1 472 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 FIG4Q92562 907 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 RND1Q92730 232 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 HOXB13Q92826 284 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-218ENST00000552839 NINJ1Q92982 152 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms