RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 MS4A4EQ96PG1 132 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ERMAPQ96PL5 475 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 GFM1Q96RP9 751 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 SERINC2Q96SA4 455 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ADOQ96SZ5 270 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 DPYSL5Q9BPU6 564 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 KLHDC3Q9BQ90 382 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 LRRC61Q9BV99 259 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PINK1Q9BXM7 581 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 WDR12Q9GZL7 423 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 MTHFD2LQ9H903 347 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 RMI1Q9H9A7 625 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 SRA1Q9HD15 236 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 AKIP1Q9NQ31 210 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PRDM6Q9NQX0 595 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 FLRT3Q9NZU0 649 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 TNFRSF10DQ9UBN6 386 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 MMP17Q9ULZ9 603 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 BOLA1Q9Y3E2 137 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 IGHV5-51A0A0C4DH38 117 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 A0A0J9YY10 115 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 A0A1W2PQL4 384 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 DAPL1A0PJW8 107 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 A6NL46 340 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 DUXAA6NLW8 204 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PRAMEF26H0Y7S4 382 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 CDC40O60508 579 aaKnown RBP eCLIP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 UBXN7O94888 489 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 WNT1P04628 370 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 F13BP05160 661 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PROS1P07225 676 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ZNF10P21506 573 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 APEX1P27695 318 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PYCR1P32322 319 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 MLLT3P42568 568 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 TMED10P49755 219 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 HMGA2P52926 109 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ERVK-25P63136 954 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 DMPKQ09013 629 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 CRMP1Q14194 572 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 KIR2DS3Q14952 304 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PRPF38BQ5VTL8 546 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 UBE2UQ5VVX9 321 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 OAFQ86UD1 273 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 DRAXINQ8NBI3 349 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 MORN4Q8NDC4 146 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 FANK1Q8TC84 345 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 GNPDA2Q8TDQ7 276 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 TMEM239Q8WW34 195 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ATOH1Q92858 354 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ZNF566Q969W8 418 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 DGAT2Q96PD7 388 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 CD180Q99467 661 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 CDCA3Q99618 268 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 LYARQ9NX58 379 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PHF11Q9UIL8 331 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ING1Q9UK53 422 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 ADAM29Q9UKF5 820 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 TMEM184BQ9Y519 407 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 SLC22A7Q9Y694 548 aa5.19□□□□□ -1.58
LIMA1-215ENST00000552823 TPRP12270 2363 aaKnown RBP5.19□□□□□ -1.58
LIMA1-215ENST00000552823 PLXNA2O75051 1894 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 TVP23AA6NH52 213 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 AGAP5A6NIR3 686 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 IDSB3KWA1 339 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 E9PI62 339 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 TGFBR3LH3BV60 316 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 SCO2O43819 266 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 APBB3O95704 486 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 RAB36O95755 333 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 GPANK1O95872 356 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 PAHP00439 452 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 TP53P04637 393 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 SLC2A2P11168 524 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 AHCYP23526 432 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 IFNGR2P38484 337 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 LIMS1P48059 325 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 CSNK2BP67870 215 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 ZP2Q05996 745 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 GNA13Q14344 377 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 ZNHIT3Q15649 155 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 ALG10BQ5I7T1 473 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 RSBN1Q5VWQ0 802 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 ZNF57Q68EA5 555 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 KIAA0895LQ68EN5 471 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 RANBP3LQ86VV4 465 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 PHC2Q8IXK0 858 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 IZUMO1Q8IYV9 350 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 SIX5Q8N196 739 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 CA13Q8N1Q1 262 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 ZNF433Q8N7K0 673 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 CLDN22Q8N7P3 220 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 ZNF563Q8TA94 476 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 BAHD1Q8TBE0 780 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 FBLIM1Q8WUP2 373 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 APOBEC4Q8WW27 367 aaKnown RBP5.18□□□□□ -1.58
LIMA1-215ENST00000552823 CAPSLQ8WWF8 208 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 GIMAP5Q96F15 307 aa5.18□□□□□ -1.58
LIMA1-215ENST00000552823 BARHL1Q9BZE3 327 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms