RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 HPGDP15428 266 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 PTNP21246 168 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 MANFP55145 182 aaKnown RBP13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 ZNF672Q499Z4 452 aaPredicted RBP13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 CLEC6AQ6EIG7 209 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 SEZ6L2Q6UXD5 910 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 ZYG11AQ6WRX3 759 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 CLHC1Q8NHS4 586 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 NANOS1Q8WY41 292 aaKnown RBP13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 ZNF524Q96C55 264 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 TSSK3Q96PN8 268 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 UBQLN4Q9NRR5 601 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 KLHL13Q9P2N7 655 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 TBK1Q9UHD2 729 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 BAIAP2L1Q9UHR4 511 aa13.16□□□□□ -0.3
TMEM106C-216ENST00000551305 CR1P17927 2039 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 SONP18583 2426 aaKnown RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 NPIPA5A0A0B4J1W7 369 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 A0A1W2PP18 115 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 NPIPA7E9PJI5 369 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 ZNF195O14628 629 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 CD5LO43866 347 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 RAMP1O60894 148 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 CD8AP01732 235 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 ABHD2P08910 425 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 ALOX5P09917 674 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 NPIPA8P0DM63 369 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 ENPP1P22413 925 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 ADH6P28332 368 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 ZNF117Q03924 483 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 TMEM176BQ3YBM2 270 aaPredicted RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 CBLN3Q6UW01 205 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 FRMD7Q6ZUT3 714 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 COX18Q8N8Q8 333 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 BANPQ8N9N5 519 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 OR2T11Q8NH01 316 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 FBXO27Q8NI29 283 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 MZB1Q8WU39 189 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 HSD17B8Q92506 261 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 JADE3Q92613 823 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 KISS1RQ969F8 398 aaPredicted RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 PPCDCQ96CD2 204 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 REXO5Q96IC2 774 aaKnown RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 MS4A4EQ96PG1 132 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 REEP4Q9H6H4 257 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 LRTM1Q9HBL6 345 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 GIN1Q9NXP7 522 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 NTMQ9P121 344 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 DCDC2Q9UHG0 476 aa13.15□□□□□ -0.3
TMEM106C-216ENST00000551305 CUBNO60494 3623 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 A0A1W2PQD3 144 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 C9JVG2 144 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 RIPK2O43353 540 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 PRKD3O94806 890 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 THBS1P07996 1170 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 UROSP10746 265 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 SDC1P18827 310 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 PRPH2P23942 346 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 EDNRAP25101 427 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 FRKP42685 505 aaPredicted RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 RNPS1Q15287 305 aaKnown RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 ETFDHQ16134 617 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 NDUFAF6Q330K2 333 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 LRIG3Q6UXM1 1119 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 DNM1P46Q6ZS02 220 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 Q6ZSR9 355 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 FCRLAQ7L513 359 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 HIPK1Q86Z02 1210 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 MISPQ8IVT2 679 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 ZFP28Q8NHY6 868 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 PIWIL2Q8TC59 973 aaKnown RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 PHOSPHO1Q8TCT1 267 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 ACMSDQ8TDX5 336 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 CDS1Q92903 461 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 CPNE4Q96A23 557 aaPredicted RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 ZNF775Q96BV0 537 aaPredicted RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 CCDC126Q96EE4 140 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 ZBED6CLQ96FA7 236 aaPredicted RBP13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 TRIM2Q9C040 744 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 COQ10BQ9H8M1 238 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 HHATLQ9HCP6 504 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 NGBQ9NPG2 151 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 TIGARQ9NQ88 270 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 C1orf109Q9NX04 203 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 PRSS50Q9UI38 385 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 CARD8Q9Y2G2 431 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
TMEM106C-216ENST00000551305 FREM1Q5H8C1 2179 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms