RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 Q9UFV3 132 aa13.94□□□□□ -0.18
PRPF40B-211ENST00000551063 DCTN4Q9UJW0 460 aa13.94□□□□□ -0.18
PRPF40B-211ENST00000551063 VDAC3Q9Y277 283 aa13.94□□□□□ -0.18
PRPF40B-211ENST00000551063 CENPEQ02224 2701 aa13.94□□□□□ -0.18
PRPF40B-211ENST00000551063 A0A0G2JND7 137 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 PRAMEF27A3QJZ7 478 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 NR5A2O00482 541 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 GMFGO60234 142 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 EIF4E2O60573 245 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 TOXO94900 526 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 C1QCP02747 245 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 UBL4AP11441 157 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 GRNP28799 593 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 CEACAM8P31997 349 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 EIF1P41567 113 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 MVDP53602 400 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 EEFSECP57772 596 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 SLC25A35Q3KQZ1 300 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 GTDC1Q4AE62 458 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 PDZK1Q5T2W1 519 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 SLC2A7Q6PXP3 512 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 FRRS1Q6ZNA5 592 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 RFWD2Q8NHY2 731 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 ARSGQ96EG1 525 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 THOC1Q96FV9 657 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 ZNF385DQ9H6B1 395 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 STOML1Q9UBI4 398 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 MKLN1Q9UL63 735 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 ICAM5Q9UMF0 924 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 AP4B1Q9Y6B7 739 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 MED12Q93074 2177 aa13.93□□□□□ -0.18
PRPF40B-211ENST00000551063 A0A096LPI6 279 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 CENPVL1A0A0U1RR11 272 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 FAM90A27PA6NNH2 459 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 CLCA1A8K7I4 914 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 GTPBP1O00178 669 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 ZNF264O43296 627 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 IL2RAP01589 272 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 LINGO3P0C6S8 592 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 HOXB9P17482 250 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 CAPN3P20807 821 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 ELK4P28324 431 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 SRYQ05066 204 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 GPAT3Q53EU6 434 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 COX20Q5RI15 118 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 LRIF1Q5T3J3 769 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 METTL21CQ5VZV1 264 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 CBLN3Q6UW01 205 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 LRRC74BQ6ZQY2 392 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 TNIP2Q8NFZ5 429 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 OR5M1Q8NGP8 315 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 PNPT1Q8TCS8 783 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 PMM1Q92871 262 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 WNT2BQ93097 391 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 ZFP3Q96NJ6 502 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 PAIP1Q9H074 479 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 RAD21L1Q9H4I0 556 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 KCNJ16Q9NPI9 418 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 SLC52A3Q9NQ40 469 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 MRGBPQ9NV56 204 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 FGFR1OP2Q9NVK5 253 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 THUMPD1Q9NXG2 353 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 CLCF1Q9UBD9 225 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 P2RX2Q9UBL9 471 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 KCNE5Q9UJ90 142 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 SLC35A3Q9Y2D2 325 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 CARD8Q9Y2G2 431 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 ZNF337Q9Y3M9 751 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 L3MBTL1Q9Y468 752 aa13.92□□□□□ -0.18
PRPF40B-211ENST00000551063 A0A1W2PP18 115 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 KDM4EB2RXH2 506 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 H3BML4 177 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 OIP5O43482 229 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 H6PDO95479 791 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 CSTAP01040 98 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 NCF2P19878 526 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 PSMA4P25789 261 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 ADH6P28332 368 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 RPS3AP61247 264 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 GUCY1A3Q02108 690 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 CHRNEQ04844 493 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 FADDQ13158 208 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 SKP2Q13309 424 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 AGKQ53H12 422 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 EIF3MQ7L2H7 374 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 OLIG3Q7RTU3 272 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 UBQLNLQ8IYU4 475 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 METTL25Q8N6Q8 603 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 ANKFN1Q8N957 763 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 NAXEQ8NCW5 288 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 FAM71CQ8NEG0 241 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 OR5W2Q8NH69 310 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 TM9SF2Q99805 663 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 TMEM120AQ9BXJ8 343 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 LAT2Q9GZY6 243 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 SLC38A1Q9H2H9 487 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms