RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FLNAP21333 2647 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CUBNO60494 3623 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 A0A1W2PPM1 405 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ARHGAP10A1A4S6 786 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 C17orf51A8MQB3 221 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 TRIM49D1C9J1S8 452 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 G3V2L1 256 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 H0YIV9 168 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 C19orf84I3L1E1 186 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SAP18O00422 153 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 PEX12O00623 359 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 NME2P1O60361 137 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 B4GALT2O60909 372 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 LDB3O75112 727 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 NME6O75414 186 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 AIFM1O95831 613 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 HEXBP07686 556 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 RNH1P13489 461 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 TSPAN8P19075 237 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 GNAZP19086 355 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 HIST1H1TP22492 207 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SPRP35270 261 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 MSH2P43246 934 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SERPINB8P50452 374 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 PLA2G16P53816 162 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 FOXA1P55317 472 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 BTN3A2P78410 334 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CAV1Q03135 178 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 FOXO1Q12778 655 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 TBL3Q12788 808 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CALCOCO2Q13137 446 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 GGTA1PQ4G0N0 100 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 UNC50Q53HI1 259 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 AGAP7PQ5VUJ5 663 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 KHDRBS2Q5VWX1 349 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SPINK14Q6IE38 97 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 TIFABQ6ZNK6 161 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 Q6ZPB1 254 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SLC16A12Q6ZSM3 486 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 HPS6Q86YV9 775 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CTAGE3PQ8IX95 158 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 IQCKQ8N0W5 287 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 FBXL14Q8N1E6 418 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 RAB42Q8N4Z0 105 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CPSF7Q8N684 471 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 TMEM217Q8N7C4 229 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 PTGR2Q8N8N7 351 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ACOT4Q8N9L9 421 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 BBOF1Q8ND07 529 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 HUS1BQ8NHY5 278 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 M1APQ8TC57 530 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 RNF138Q8WVD3 245 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ITLN2Q8WWU7 325 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ATL1Q8WXF7 558 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 NCLNQ969V3 563 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 RERGQ96A58 199 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 AGAP4Q96P64 663 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 KCNA7Q96RP8 456 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 HBEGFQ99075 208 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 FMO2Q99518 471 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 NPAS1Q99742 590 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 EGFL8Q99944 293 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 AIF1LQ9BQI0 150 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SF3B5Q9BWJ5 86 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 HDHD5Q9BXW7 423 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SLC7A5P2Q9GIP4 190 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 WDR12Q9GZL7 423 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 RAB17Q9H0T7 212 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ANKHQ9HCJ1 492 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 PNRC2Q9NPJ4 139 aaKnown RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 WWOXQ9NZC7 414 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 ABI3Q9P2A4 366 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CDC14AQ9UNH5 594 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 LRCH1Q9Y2L9 728 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 CCL27Q9Y4X3 112 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 KCNE2Q9Y6J6 123 aa4.44□□□□□ -1.7
SCAF11-214ENST00000550893 NSD1Q96L73 2696 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-214ENST00000550893 FREM1Q5H8C1 2179 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TRBV5-7A0A0A0MS05 114 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CCDC189A1A4V9 331 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ANKUB1A6NFN9 424 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 GABRR3A8MPY1 467 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 A8MUA0 341 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 SUPT3HB4E1H0 165 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 STX16-NPEPL1H3BU86 382 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TXNDC9O14530 226 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 STX16O14662 325 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ZG16O60844 167 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 SUPT3HO75486 399 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ACTL6BO94805 426 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 MYO1DO94832 1006 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 GLSO94925 669 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 OR6B1O95007 311 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 GBAP04062 536 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CCL3P10147 92 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 GP1BBP13224 206 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms