RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 CSPG4Q6UVK1 2322 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 DSCAMO60469 2012 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 A0A1W2PQD3 144 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 TRIM13O60858 407 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 NUDT14O95848 222 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 LINGO3P0C6S8 592 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 SHC1P29353 583 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 AGTR1P30556 359 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 EIF1P41567 113 aaKnown RBP16.91■□□□□ 0.3
LETMD1-224ENST00000550446 ASMTP46597 345 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 LASP1Q14847 261 aaKnown RBP16.91■□□□□ 0.3
LETMD1-224ENST00000550446 KANK2Q63ZY3 851 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 PRIMA1Q86XR5 153 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 TDRPQ86YL5 185 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 ATP6V1C2Q8NEY4 427 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 OR7A2PQ8NGA2 310 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 EPS8L3Q8TE67 593 aaKnown RBP16.91■□□□□ 0.3
LETMD1-224ENST00000550446 MTERF3Q96E29 417 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 TRMOQ9BU70 441 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 CXorf56Q9H5V9 222 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 GIMAP2Q9UG22 337 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 TRAF6Q9Y4K3 522 aa16.91■□□□□ 0.3
LETMD1-224ENST00000550446 TMEM233B4DJY2 109 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 ZNF195O14628 629 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 HS3ST1O14792 307 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 OIP5O43482 229 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 EFNA2O43921 213 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 HSPA4LO95757 839 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 CHRNGP07510 517 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 PABPC4LP0CB38 370 aaKnown RBP16.9■□□□□ 0.3
LETMD1-224ENST00000550446 ATP6V1C1P21283 382 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 ZNF117Q03924 483 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 FOXF1Q12946 379 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 PCLAFQ15004 111 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 TSC22D1Q15714 1073 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 TMEM176BQ3YBM2 270 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-224ENST00000550446 TMEM201Q5SNT2 666 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 NUFIP2Q7Z417 695 aaKnown RBP16.9■□□□□ 0.3
LETMD1-224ENST00000550446 ZNF611Q8N823 705 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 STEAP2Q8NFT2 490 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 FBXO27Q8NI29 283 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 ABHD3Q8WU67 409 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 IGFBPL1Q8WX77 278 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 AKAP1Q92667 903 aaKnown RBP eCLIP16.9■□□□□ 0.3
LETMD1-224ENST00000550446 S100PBPQ96BU1 408 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 PIGUQ9H490 435 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 SIRT3Q9NTG7 399 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-224ENST00000550446 MID2Q9UJV3 735 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 CARD8Q9Y2G2 431 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 TLN2Q9Y4G6 2542 aa16.9■□□□□ 0.3
LETMD1-224ENST00000550446 NPIPA5A0A0B4J1W7 369 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 TLDC2A0PJX2 215 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 TMEM114B3SHH9 223 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 INAFM1C9JVW0 142 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 NPIPA7E9PJI5 369 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 GTPBP1O00178 669 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 PIP5K1BO14986 540 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 PEX11AO75192 247 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 FGF4P08620 206 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 NPIPA8P0DM63 369 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 LAMP1P11279 417 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 DDX5P17844 614 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 PSMB1P20618 241 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 HPCAL1P37235 193 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 CCT3P49368 545 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 ATP5J2P56134 94 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 PPP2R2BQ00005 443 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 MLC1Q15049 377 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 ZNF239Q16600 458 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 UGT3A2Q3SY77 523 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 KLHL26Q53HC5 615 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 ARL13AQ5H913 290 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 EXOSC6Q5RKV6 272 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 CBLN3Q6UW01 205 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 RNF165Q6ZSG1 346 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 TUSC5Q8IXB3 177 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 ZNF527Q8NB42 609 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 RAB3IL1Q8TBN0 382 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 AGR3Q8TD06 166 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 TWIST2Q8WVJ9 160 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 STACQ99469 402 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 TACO1Q9BSH4 297 aaKnown RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 TMEM204Q9BSN7 226 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 HDHD5Q9BXW7 423 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 SRXN1Q9BYN0 137 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 HOXD1Q9GZZ0 328 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 PPCSQ9HAB8 311 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 DUSP22Q9NRW4 184 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 ZNF701Q9NV72 531 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-224ENST00000550446 ATP6V1HQ9UI12 483 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 LAMP3Q9UQV4 416 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 USF3Q68DE3 2245 aa16.89■□□□□ 0.29
LETMD1-224ENST00000550446 KIAA1324LA8MWY0 1029 aaPredicted RBP16.88■□□□□ 0.29
LETMD1-224ENST00000550446 H3BNH8 94 aa16.88■□□□□ 0.29
LETMD1-224ENST00000550446 SCAMP2O15127 329 aaKnown RBP16.88■□□□□ 0.29
LETMD1-224ENST00000550446 PAX1P15863 534 aa16.88■□□□□ 0.29
LETMD1-224ENST00000550446 ALDH3A1P30838 453 aa16.88■□□□□ 0.29
LETMD1-224ENST00000550446 ZNF844Q08AG5 666 aa16.88■□□□□ 0.29
LETMD1-224ENST00000550446 TP53BP2Q13625 1128 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms