RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 FOXK1P85037 733 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
RAB5C-206ENST00000550406 SKP2Q13309 424 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 FXNQ16595 210 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 MRPL2Q5T653 305 aaKnown RBP11.86□□□□□ -0.51
RAB5C-206ENST00000550406 BNC2Q6ZN30 1099 aaPredicted RBP11.86□□□□□ -0.51
RAB5C-206ENST00000550406 EIF3MQ7L2H7 374 aaKnown RBP11.86□□□□□ -0.51
RAB5C-206ENST00000550406 MISPQ8IVT2 679 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 SLC30A8Q8IWU4 369 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 NR4A3Q92570 626 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 SH3YL1Q96HL8 342 aaPredicted RBP11.86□□□□□ -0.51
RAB5C-206ENST00000550406 NPAS1Q99742 590 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 SLX1AQ9BQ83 275 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 WFDC6Q9BQY6 131 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 LAT2Q9GZY6 243 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 DEFB127Q9H1M4 99 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 LIPGQ9Y5X9 500 aa11.86□□□□□ -0.51
RAB5C-206ENST00000550406 SVILO95425 2214 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CDHR4A6H8M9 788 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 NPIPA5E9PKD4 350 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 ZNF264O43296 627 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 GMFGO60234 142 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 EIF4E2O60573 245 aaKnown RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 DNAJA2O60884 412 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CSTAP01040 98 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CRYABP02511 175 aaKnown RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 OPN1SWP03999 348 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 HPNP05981 417 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 UBL4AP11441 157 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 ZNF24P17028 368 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CD247P20963 164 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 GDF1P27539 372 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 MSX1P28360 303 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 HTR1EP28566 365 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 KDELR2P33947 212 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 TOMM34Q15785 309 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 DUSP7Q16829 419 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 EIPR1Q53HC9 387 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 ZNF311Q5JNZ3 666 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 DHRS4L2Q6PKH6 230 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 FAM180AQ6UWF9 173 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 ARSKQ6UWY0 536 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 SLC22A16Q86VW1 577 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 LSRQ86X29 649 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 GRAMD2AQ8IUY3 354 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CHERPQ8IWX8 916 aaKnown RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 GPR32P1Q8NGA4 272 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 B4GALNT2Q8NHY0 566 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CPT1CQ8TCG5 803 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 GPR119Q8TDV5 335 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 CLPTM1LQ96KA5 538 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 KCTD14Q9BQ13 255 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 DNAJB12Q9NXW2 375 aaKnown RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 EGFL7Q9UHF1 273 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 NPIPA1Q9UND3 350 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 SLC35A3Q9Y2D2 325 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 IFT52Q9Y366 437 aa11.85□□□□□ -0.51
RAB5C-206ENST00000550406 MRPS18CQ9Y3D5 142 aaKnown RBP11.85□□□□□ -0.51
RAB5C-206ENST00000550406 ANKUB1A6NFN9 424 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 H3BNH8 94 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 CXCR6O00574 342 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 AP3D1O14617 1153 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 TFECO14948 347 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 FRS3O43559 492 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 HCRTR2O43614 444 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 CDC40O60508 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 IGHG3P01860 377 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 UBTFL6P0CB48 400 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 GKN3PP0CG01 181 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 PRG2P13727 222 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 NCK1P16333 377 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 GGT1P19440 569 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 DPP4P27487 766 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 ACAA2P42765 397 aaKnown RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 KCNJ5P48544 419 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 P2RX1P51575 399 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 LIN52Q52LA3 116 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 WIPI1Q5MNZ9 446 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 SAMD4BQ5PRF9 694 aaKnown RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 INTS11Q5TA45 600 aaKnown RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 RNF220Q5VTB9 566 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 FGD2Q7Z6J4 655 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 PATL1Q86TB9 770 aaKnown RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 YRDCQ86U90 279 aaKnown RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 ARMC8Q8IUR7 673 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 CMIPQ8IY22 773 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 SMYD1Q8NB12 490 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 FAM83FQ8NEG4 500 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-206ENST00000550406 OR4K17Q8NGC6 315 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 POC1BQ8TC44 478 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 C1GALT1C1Q96EU7 318 aa11.84□□□□□ -0.51
RAB5C-206ENST00000550406 GPR137Q96N19 417 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms