RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 G6PDP11413 515 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 FCGR2AP12318 317 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 NID1P14543 1247 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 RPL3P39023 403 aaKnown RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF41P51814 821 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 TP53BP2Q13625 1128 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 TOMM34Q15785 309 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 NDUFAF6Q330K2 333 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 MISPQ8IVT2 679 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 CLEC4FQ8N1N0 589 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 PHOSPHO1Q8TCT1 267 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 ADAMTS15Q8TE58 950 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 OSTF1Q92882 214 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 CAVIN3Q969G5 261 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 TUBGCP3Q96CW5 907 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 GMPPAQ96IJ6 420 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 PKNOX2Q96KN3 472 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 SMR3AQ99954 134 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 C20orf27Q9GZN8 174 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 BEX4Q9NWD9 120 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 STOML1Q9UBI4 398 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 ICAM5Q9UMF0 924 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 CARD8Q9Y2G2 431 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 WDR91A4D1P6 747 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 NPIPB9F8W1W9 429 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 HSPA4LO95757 839 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 PLGP00747 810 aaPredicted RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 FOSL1P15407 271 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 DDX5P17844 614 aaKnown RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 PRPS1L1P21108 318 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 CARD18P57730 90 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 HBA1P69905 142 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 NKX6-1P78426 367 aaPredicted RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 EMX2Q04743 252 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 FOXF1Q12946 379 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 LSM12Q3MHD2 195 aaKnown RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 DCST2Q5T1A1 773 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 HBMQ6B0K9 141 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 EMBQ6PCB8 327 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 STAC2Q6ZMT1 411 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 ESPNLQ6ZVH7 1005 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 OR56A1Q8NGH5 318 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 OR5D16Q8NGK9 328 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 OR6K3Q8NGY3 331 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 OR5AK3PQ8NH89 298 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 ROBO4Q8WZ75 1007 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 DUSP26Q9BV47 211 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 TMEM109Q9BVC6 243 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 BHLHE41Q9C0J9 482 aaPredicted RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 HOXD1Q9GZZ0 328 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 SERHL2Q9H4I8 314 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 HHATLQ9HCP6 504 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 ATAD3AQ9NVI7 634 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 PAQR5Q9NXK6 330 aaPredicted RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 MCTS1Q9ULC4 181 aaKnown RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 FAF1Q9UNN5 650 aaPredicted RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 EMC9Q9Y3B6 208 aa11.93□□□□□ -0.5
CPSF6-204ENST00000547486 V9GYY5 206 aaPredicted RBP11.93□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF195O14628 629 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 KLF4O43474 513 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 SYNGR4O95473 234 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 NTN1O95631 604 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 ATP6V1C1P21283 382 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 SFTPDP35247 375 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 ATP12AP54707 1039 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 CTBP2P56545 445 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 CLDN8P56748 225 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 C21orf58P58505 322 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 RPS26P62854 115 aaKnown RBP11.92□□□□□ -0.5
CPSF6-204ENST00000547486 ACKR1Q16570 336 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 PGS1Q32NB8 556 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 WDR93Q6P2C0 686 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 OLIG3Q7RTU3 272 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 MTERF4Q7Z6M4 381 aaKnown RBP11.92□□□□□ -0.5
CPSF6-204ENST00000547486 CLECL1Q8IZS7 167 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 NATD1Q8N6N6 113 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 FBXO27Q8NI29 283 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 GPR119Q8TDV5 335 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 PPP1R36Q96LQ0 422 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 KLHL15Q96M94 604 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 OR7D2Q96RA2 312 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 SDF2Q99470 211 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 PRPF18Q99633 342 aaKnown RBP11.92□□□□□ -0.5
CPSF6-204ENST00000547486 SRXN1Q9BYN0 137 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 KCNE5Q9UJ90 142 aa11.92□□□□□ -0.5
CPSF6-204ENST00000547486 NIPBLQ6KC79 2804 aaeCLIP11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ESPNB1AK53 854 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 CFLARO15519 480 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 FCMRO60667 390 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 PRKCAP17252 672 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ME2P23368 584 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 AGTR1P30556 359 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms