RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 P2RX1P51575 399 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 CARD18P57730 90 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 ABCE1P61221 599 aaKnown RBP8.4□□□□□ -1.06
YBX3-218ENST00000546298 ZNF844Q08AG5 666 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 POU4F3Q15319 338 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 GUSBP1Q15486 140 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 CD226Q15762 336 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 CHI3L2Q15782 390 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 KLHL26Q53HC5 615 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 GGNQ86UU5 652 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 RIMKLAQ8IXN7 391 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 LRRC34Q8IZ02 419 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 LILRA2Q8N149 483 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 KRTCAP2Q8N6L1 136 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 OSTF1Q92882 214 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 OTUB1Q96FW1 271 aaPredicted RBP8.4□□□□□ -1.06
YBX3-218ENST00000546298 ADGRG7Q96K78 797 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 KLHL15Q96M94 604 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 RNF145Q96MT1 663 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 PARD6BQ9BYG5 372 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 DPY30Q9C005 99 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 PLSCR4Q9NRQ2 329 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 EXD2Q9NVH0 621 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 GPATCH2Q9NW75 528 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 BEX4Q9NWD9 120 aaPredicted RBP8.4□□□□□ -1.06
YBX3-218ENST00000546298 KLHL28Q9NXS3 571 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 RAP2CQ9Y3L5 183 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 DTNAQ9Y4J8 743 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 GPC6Q9Y625 555 aaPredicted RBP8.4□□□□□ -1.06
YBX3-218ENST00000546298 NBPF19A0A087WUL8 3843 aa8.4□□□□□ -1.07
YBX3-218ENST00000546298 ABCA4P78363 2273 aa8.4□□□□□ -1.07
YBX3-218ENST00000546298 A0A0J9YW62 118 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 RNASET2O00584 256 aaKnown RBP8.39□□□□□ -1.07
YBX3-218ENST00000546298 ZNF195O14628 629 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 TNFSF11O14788 317 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ARHGEF9O43307 516 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 SS18L1O75177 396 aaPredicted RBP8.39□□□□□ -1.07
YBX3-218ENST00000546298 STX11O75558 287 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 AGR2O95994 175 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 LINGO3P0C6S8 592 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 LBPP18428 481 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 FPR1P21462 350 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 MATN1P21941 496 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 CRYGSP22914 178 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 SLC6A8P48029 635 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 SLC1A6P48664 564 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 HBA1P69905 142 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ZNF117Q03924 483 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 PDCD2Q16342 344 aaPredicted RBP8.39□□□□□ -1.07
YBX3-218ENST00000546298 CTU2Q2VPK5 515 aaKnown RBP8.39□□□□□ -1.07
YBX3-218ENST00000546298 TMEM201Q5SNT2 666 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 CEP85LQ5SZL2 805 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ATAD3BQ5T9A4 648 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ANXA8L1Q5VT79 327 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 BEND4Q6ZU67 534 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 C6orf120Q7Z4R8 191 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ZNF614Q8N883 585 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ZNF781Q8N8C0 355 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 TOR1AIP2Q8NFQ8 470 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 FBXO27Q8NI29 283 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 POC1BQ8TC44 478 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 PIGTQ969N2 578 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 CPNE4Q96A23 557 aaPredicted RBP8.39□□□□□ -1.07
YBX3-218ENST00000546298 PKNOX2Q96KN3 472 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 MRGPRX4Q96LA9 322 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 OR7D2Q96RA2 312 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 KLHL4Q9C0H6 718 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 NMUR2Q9GZQ4 415 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 CENPHQ9H3R5 247 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 TMEM185BQ9H7F4 350 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 AKTIPQ9H8T0 292 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 KCNK9Q9NPC2 374 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 ICAM5Q9UMF0 924 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 CARD8Q9Y2G2 431 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 MED12Q93074 2177 aa8.39□□□□□ -1.07
YBX3-218ENST00000546298 PRSS51A0A1B0GVH4 220 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 SERINC4A6NH21 518 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 DEFB108AA8MXU0 73 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 NPIPB9F8W1W9 429 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 ZNF264O43296 627 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 ITM2AO43736 263 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 OPN1LWP04000 364 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 DHRS4L1P0CG22 281 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 UBL4AP11441 157 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 CD53P19397 219 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 UQCRC2P22695 453 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 SFTPDP35247 375 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 CLNS1AP54105 237 aaKnown RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 ADAM8P78325 824 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 FOXF1Q12946 379 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 STX3Q13277 289 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 RNPS1Q15287 305 aaKnown RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 EXOC3L2Q2M3D2 409 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 DPY19L1Q2PZI1 675 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 TMEM176BQ3YBM2 270 aaPredicted RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 BEX5Q5H9J7 111 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 SHEQ5VZ18 495 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 OR4F3Q6IEY1 312 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 CBLN3Q6UW01 205 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 C16orf62Q7Z3J2 963 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms